RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 VGLL1Q99990 258 aa4.39□□□□□ -1.71
CDH13-213ENST00000569454 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
CDH13-213ENST00000569454 VCX2Q9H322 139 aa4.39□□□□□ -1.71
CDH13-213ENST00000569454 UQCR10Q9UDW1 63 aa4.39□□□□□ -1.71
CDH13-213ENST00000569454 UFC1Q9Y3C8 167 aa4.39□□□□□ -1.71
CDH13-213ENST00000569454 DCHS2Q6V1P9 2916 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 TRAV9-2A0A087WT02 112 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 TRAV8-2A0A0B4J237 113 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 TRAV21A0A0B4J279 112 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 IGHV1-24A0A0C4DH33 117 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 IGHV7-4-1A0A0J9YVY3 117 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 C2orf70A6NJV1 201 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 FSHBP01225 129 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 ELANEP08246 267 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 PSMB8P28062 276 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 ID1P41134 155 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 TWIST1Q15672 202 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 PRSS57Q6UWY2 283 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 IL17RELQ6ZVW7 336 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 GPHB5Q86YW7 130 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 FAM19A2Q8N3H0 131 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 Q8N976 141 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 ZNF738Q8NE65 137 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 OR4X2Q8NGF9 303 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 PRELID3AQ96N28 172 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 AGPAT4-IT1Q9H0P7 198 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 NXT2Q9NPJ8 142 aaKnown RBP4.38□□□□□ -1.71
CDH13-213ENST00000569454 VPREB3Q9UKI3 123 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 PAM16Q9Y3D7 125 aa4.38□□□□□ -1.71
CDH13-213ENST00000569454 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 IGHV4-4A0A075B6R2 117 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 IGHV3OR16-8A0A075B7F1 116 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 TMSB15BA0A087X1C1 80 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 F8WDY8 70 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 SYS1-DBNDD2H3BUS1 97 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 SOCS3O14543 225 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 SNAI2O43623 268 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 TNFRSF6BO95407 300 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 RNF224P0DH78 156 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 CKS2P33552 79 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 DEFB113Q30KQ7 82 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 SPATA45Q537H7 98 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 ZNF705AQ6ZN79 300 aaPredicted RBP4.37□□□□□ -1.71
CDH13-213ENST00000569454 APRG1Q8IVJ8 170 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 RNF182Q8N6D2 247 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 URB1-AS1Q96HZ7 61 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 ODF3Q96PU9 254 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 MAP1LC3AQ9H492 121 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 SMPXQ9UHP9 88 aa4.37□□□□□ -1.71
CDH13-213ENST00000569454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.37□□□□□ -1.71
CDH13-213ENST00000569454 IGHV3-66A0A0C4DH42 116 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 LINC01546A6NGU7 62 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 OR4C46A6NHA9 309 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 PRAC2D3DTV9 90 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 D6R8Y8 96 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 K7EMI3 77 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 M0QZ24 198 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 LGALS9O00182 355 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 ZNF207O43670 478 aaKnown RBP4.36□□□□□ -1.71
CDH13-213ENST00000569454 TCF21O43680 179 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 PPP1R17O96001 155 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 IGHV4-59P01825 116 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 HBDP02042 147 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 IGHV4-31P0DP07 118 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 CD33P20138 364 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 HLA-DMBP28068 263 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
CDH13-213ENST00000569454 HNRNPA3P51991 378 aaKnown RBP4.36□□□□□ -1.71
CDH13-213ENST00000569454 BLCAPP62952 87 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 ERCC8Q13216 396 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 DEFB112Q30KQ8 113 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 MRPL51Q4U2R6 128 aaKnown RBP4.36□□□□□ -1.71
CDH13-213ENST00000569454 EBLN2Q6P2I7 272 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 UNQ9165/PRO28630Q6UXU0 137 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 AMN1Q8IY45 258 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 TMEM86BQ8N661 226 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 DEFB125Q8N687 156 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 RHPN1-AS1Q9BWJ2 59 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 MS4A6AQ9H2W1 248 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 LINC00527Q9UJ94 153 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 MRPS16Q9Y3D3 137 aaKnown RBP4.36□□□□□ -1.71
CDH13-213ENST00000569454 RNF114Q9Y508 228 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 AKAP6Q13023 2319 aa4.36□□□□□ -1.71
CDH13-213ENST00000569454 RYR2Q92736 4967 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 IGHV3OR16-13A0A075B7E8 117 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 IGHV3-49A0A0A0MS15 119 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 IGHV3-74A0A0B4J1X5 117 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 TMEM213A2RRL7 107 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 LINC01549A6NIU2 74 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 TRBV12-3P01733 135 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 IGHV3-11P01762 117 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 LGALS1P09382 135 aaKnown RBP4.35□□□□□ -1.71
CDH13-213ENST00000569454 ASIPP42127 132 aa4.35□□□□□ -1.71
CDH13-213ENST00000569454 SNRPD3P62318 126 aaKnown RBP4.35□□□□□ -1.71
CDH13-213ENST00000569454 Q5PR19 223 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms