RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 IFNA7P01567 189 aa12.14□□□□□ -0.47
EDC3-215ENST00000569007 ZNF80P51504 273 aaPredicted RBP12.14□□□□□ -0.47
EDC3-215ENST00000569007 ZNF345Q14585 488 aa12.14□□□□□ -0.47
EDC3-215ENST00000569007 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
EDC3-215ENST00000569007 TMEM75Q8N9X5 138 aa12.14□□□□□ -0.47
EDC3-215ENST00000569007 RASL10AQ92737 203 aa12.14□□□□□ -0.47
EDC3-215ENST00000569007 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
EDC3-215ENST00000569007 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 HMSDA8MTL9 139 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 GCGP01275 180 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 TYMSP04818 313 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 FHL2Q14192 279 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 C1orf134Q5TEV5 83 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 KCNS1Q96KK3 526 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 C11orf21Q9P2W6 132 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 PRO0255Q9UI72 69 aa12.13□□□□□ -0.47
EDC3-215ENST00000569007 TRAV34A0A0B4J273 112 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 A0A1B0GVY2 172 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 FBLL1A6NHQ2 334 aaKnown RBP12.12□□□□□ -0.47
EDC3-215ENST00000569007 FAM74A7A6NL05 159 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 SFTA3P0C7M3 94 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 SLAQ13239 276 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 SMUG1Q53HV7 270 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 ZNF479Q96JC4 524 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 Q9H8V8 135 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 HHLA3Q9XRX5 114 aa12.12□□□□□ -0.47
EDC3-215ENST00000569007 DNAH11Q96DT5 4516 aa12.11□□□□□ -0.47
EDC3-215ENST00000569007 M0R2P5 195 aa12.11□□□□□ -0.47
EDC3-215ENST00000569007 FHITP49789 147 aa12.11□□□□□ -0.47
EDC3-215ENST00000569007 CRYBA4P53673 196 aa12.11□□□□□ -0.47
EDC3-215ENST00000569007 ZFP69Q49AA0 526 aa12.11□□□□□ -0.47
EDC3-215ENST00000569007 SAPCD1Q5SSQ6 148 aa12.11□□□□□ -0.47
EDC3-215ENST00000569007 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
EDC3-215ENST00000569007 ICOSQ9Y6W8 199 aa12.11□□□□□ -0.47
EDC3-215ENST00000569007 TRGV4A0A0C4DH28 118 aa12.1□□□□□ -0.47
EDC3-215ENST00000569007 A0A0D9SG52 128 aa12.1□□□□□ -0.47
EDC3-215ENST00000569007 PEX7O00628 323 aa12.1□□□□□ -0.47
EDC3-215ENST00000569007 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
EDC3-215ENST00000569007 PPT1P50897 306 aa12.1□□□□□ -0.47
EDC3-215ENST00000569007 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
EDC3-215ENST00000569007 ZNF471Q9BX82 626 aaPredicted RBP12.1□□□□□ -0.47
EDC3-215ENST00000569007 NKX6-2Q9C056 277 aaPredicted RBP12.1□□□□□ -0.47
EDC3-215ENST00000569007 KANTRA0A1W2PQU2 76 aa12.09□□□□□ -0.47
EDC3-215ENST00000569007 BCL2L11O43521 198 aa12.09□□□□□ -0.47
EDC3-215ENST00000569007 SEC11BP0C7V7 166 aa12.09□□□□□ -0.47
EDC3-215ENST00000569007 STOML3Q8TAV4 291 aa12.09□□□□□ -0.47
EDC3-215ENST00000569007 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
EDC3-215ENST00000569007 DYNC1H1Q14204 4646 aaKnown RBP12.09□□□□□ -0.47
EDC3-215ENST00000569007 TRAV4A0A0B4J268 109 aa12.08□□□□□ -0.48
EDC3-215ENST00000569007 Q86TA4 180 aa12.08□□□□□ -0.48
EDC3-215ENST00000569007 C6orf223Q8N319 242 aa12.08□□□□□ -0.48
EDC3-215ENST00000569007 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
EDC3-215ENST00000569007 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.48
EDC3-215ENST00000569007 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
EDC3-215ENST00000569007 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
EDC3-215ENST00000569007 CST9LP1Q5W188 147 aa12.07□□□□□ -0.48
EDC3-215ENST00000569007 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
EDC3-215ENST00000569007 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
EDC3-215ENST00000569007 C9JCJ5 164 aa12.06□□□□□ -0.48
EDC3-215ENST00000569007 ZNF876PQ49A33 203 aa12.06□□□□□ -0.48
EDC3-215ENST00000569007 TTC32Q5I0X7 151 aa12.06□□□□□ -0.48
EDC3-215ENST00000569007 TMUB2Q71RG4 321 aa12.06□□□□□ -0.48
EDC3-215ENST00000569007 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
EDC3-215ENST00000569007 HERC2O95714 4834 aa12.05□□□□□ -0.48
EDC3-215ENST00000569007 A0A1B0GV50 99 aa12.05□□□□□ -0.48
EDC3-215ENST00000569007 PFDN1O60925 122 aa12.05□□□□□ -0.48
EDC3-215ENST00000569007 GYPEP15421 78 aa12.05□□□□□ -0.48
EDC3-215ENST00000569007 MBD3L1Q8WWY6 194 aa12.05□□□□□ -0.48
EDC3-215ENST00000569007 C9orf85Q96MD7 179 aa12.05□□□□□ -0.48
EDC3-215ENST00000569007 IGKV3D-20A0A0C4DH25 116 aa12.04□□□□□ -0.48
EDC3-215ENST00000569007 FABP5P3A8MUU1 101 aa12.04□□□□□ -0.48
EDC3-215ENST00000569007 K7EQD1 137 aa12.04□□□□□ -0.48
EDC3-215ENST00000569007 PAGE4O60829 102 aa12.04□□□□□ -0.48
EDC3-215ENST00000569007 NXPH4O95158 308 aa12.04□□□□□ -0.48
EDC3-215ENST00000569007 EIF5AP63241 154 aaKnown RBP12.04□□□□□ -0.48
EDC3-215ENST00000569007 NEGR1Q7Z3B1 354 aa12.04□□□□□ -0.48
EDC3-215ENST00000569007 PCNPQ8WW12 178 aaKnown RBP12.04□□□□□ -0.48
EDC3-215ENST00000569007 KIAA1109Q2LD37 5005 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 RNASE3P12724 160 aaKnown RBP12.03□□□□□ -0.48
EDC3-215ENST00000569007 SRIP30626 198 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 TNP2Q05952 138 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 FMC1Q96HJ9 113 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 ZFP30Q9Y2G7 519 aa12.03□□□□□ -0.48
EDC3-215ENST00000569007 A0A1W2PPQ1 181 aa12.02□□□□□ -0.49
EDC3-215ENST00000569007 SIVA1O15304 175 aa12.02□□□□□ -0.49
EDC3-215ENST00000569007 ORM1P02763 201 aa12.02□□□□□ -0.49
EDC3-215ENST00000569007 TPT1P13693 172 aaKnown RBP12.02□□□□□ -0.49
EDC3-215ENST00000569007 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
EDC3-215ENST00000569007 CRIP1P50238 77 aa12.02□□□□□ -0.49
EDC3-215ENST00000569007 UBE2G1P62253 170 aa12.02□□□□□ -0.49
EDC3-215ENST00000569007 CFAP126Q5VTH2 177 aa12.02□□□□□ -0.49
EDC3-215ENST00000569007 LOC100131303A0A0U1RQF7 123 aa12.01□□□□□ -0.49
EDC3-215ENST00000569007 PGPEP1LA6NFU8 196 aa12.01□□□□□ -0.49
EDC3-215ENST00000569007 RS1O15537 224 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms