RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PRRT1Q99946 306 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 TXNDC17Q9BRA2 123 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 SLC25A31Q9H0C2 315 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 RNF24Q9Y225 148 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 STRAPQ9Y3F4 350 aaKnown RBP3.66□□□□□ -1.82
CDH13-211ENST00000568770 PXMP4Q9Y6I8 212 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 IGHV1OR15-1A0A075B7D0 117 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 TRAV8-6A0A0B4J262 113 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 DUXBA0A1W2PPF3 345 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 RBFOX3A6NFN3 312 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 GPX1P07203 203 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 OR4E1P0C645 316 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 AKAIN1P0CW23 69 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 ANXA3P12429 323 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 PPT1P50897 306 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 RPL37AP61513 92 aaKnown RBP3.65□□□□□ -1.83
CDH13-211ENST00000568770 VBP1P61758 197 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 SLC38A11Q08AI6 406 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 ASAH1Q13510 395 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 ACOT6Q3I5F7 207 aaPredicted RBP3.65□□□□□ -1.83
CDH13-211ENST00000568770 TDRG1Q3Y452 100 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 OR10J3Q5JRS4 329 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 ADAMTSL4-AS1Q5T5F5 129 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 PRR9Q5T870 116 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 NHLRC2Q8NBF2 726 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 OR10P1Q8NGE3 313 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 OR10G4Q8NGN3 311 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 C15orf40Q8WUR7 153 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 TMEM37Q8WXS4 190 aa3.65□□□□□ -1.83
CDH13-211ENST00000568770 K7EPK0 472 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 M0R3E3 92 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 GOSR2O14653 212 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 COX7A2P2O60397 106 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 GAS8-AS1O95177 125 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 SLC25A6P12236 298 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 RRAS2P62070 204 aaPredicted RBP3.64□□□□□ -1.83
CDH13-211ENST00000568770 LAGE3Q14657 143 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 ZNF846Q147U1 533 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 OPCMLQ14982 345 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 GUK1Q16774 197 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 C14orf177Q52M58 125 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 LBHQ53QV2 105 aaPredicted RBP3.64□□□□□ -1.83
CDH13-211ENST00000568770 SH2D6Q7Z4S9 175 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 BAALCQ8WXS3 180 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 AP3S1Q92572 193 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 RASL10AQ92737 203 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 LINC00477Q96M19 166 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 SCGB3A2Q96PL1 93 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 FUNDC2Q9BWH2 189 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 AGPAT4-IT1Q9H0P7 198 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 Q9H521 79 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 NPVFQ9HCQ7 196 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 MCUBQ9NWR8 336 aa3.64□□□□□ -1.83
CDH13-211ENST00000568770 PIGBOS1A0A0B4J2F0 54 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 AGPAT2O15120 278 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 NMBP08949 121 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 CRISP2P16562 243 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 POLR2GP62487 172 aaKnown RBP eCLIP3.63□□□□□ -1.83
CDH13-211ENST00000568770 MUC21Q5SSG8 566 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 C10orf113Q5VZT2 155 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 ZNF546Q86UE3 836 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 ZFAND2AQ8N6M9 145 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 OR4C5Q8NGB2 326 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 OCC1Q8TAD7 63 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 RAB2BQ8WUD1 216 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 SMIM4Q8WVI0 70 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 MRPL53Q96EL3 112 aaKnown RBP3.63□□□□□ -1.83
CDH13-211ENST00000568770 MIXL1Q9H2W2 232 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 PSENENQ9NZ42 101 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 CCDC59Q9P031 241 aaKnown RBP3.63□□□□□ -1.83
CDH13-211ENST00000568770 SCP2D1Q9UJQ7 156 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 RABL2BQ9UNT1 228 aa3.63□□□□□ -1.83
CDH13-211ENST00000568770 TRBV19A0A075B6N1 114 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 IGKV2-40A0A087WW87 121 aaPredicted RBP3.62□□□□□ -1.83
CDH13-211ENST00000568770 TRAV8-3A0A0A6YYJ7 113 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 TRAV4A0A0B4J268 109 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 IGHV3-16A0A0C4DH30 117 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 ANKRD20A5PA0PJZ0 165 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 FNDC10F2Z333 226 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 RGS5O15539 181 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 SSSCA1O60232 199 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 ZNF253O75346 499 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 IGKV2D-40P01614 121 aaPredicted RBP3.62□□□□□ -1.83
CDH13-211ENST00000568770 PFN1P07737 140 aaKnown RBP3.62□□□□□ -1.83
CDH13-211ENST00000568770 METTL15P1P0C7V9 234 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 MRPS10P82664 201 aaKnown RBP3.62□□□□□ -1.83
CDH13-211ENST00000568770 TMEM128Q5BJH2 165 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 LELP1Q5T871 98 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 EXOC3-AS1Q8N2X6 119 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 Q8N976 141 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 MGST2Q99735 147 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 SRRQ9GZT4 340 aa3.62□□□□□ -1.83
CDH13-211ENST00000568770 RNF222A6NCQ9 220 aa3.61□□□□□ -1.83
CDH13-211ENST00000568770 FABP12A6NFH5 140 aa3.61□□□□□ -1.83
CDH13-211ENST00000568770 HIST1H1EP10412 219 aaKnown RBP3.61□□□□□ -1.83
CDH13-211ENST00000568770 GATA1P15976 413 aaPredicted RBP3.61□□□□□ -1.83
CDH13-211ENST00000568770 UBE2MP61081 183 aaKnown RBP3.61□□□□□ -1.83
CDH13-211ENST00000568770 IL18Q14116 193 aa3.61□□□□□ -1.83
CDH13-211ENST00000568770 TMEM183BQ1AE95 376 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms