RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 VMO1Q7Z5L0 202 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 NIT1Q86X76 327 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 TEX29Q8N6K0 151 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 Q8N6K4 173 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 OR2D3Q8NGH3 330 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 ZNF414Q96IQ9 312 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 TMEM70Q9BUB7 260 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 SNHG12Q9BXW3 62 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 TMEM191AQ9H0A3 160 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 ST20Q9HBF5 79 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 PEMTQ9UBM1 199 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 RABAC1Q9UI14 185 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 PSG8Q9UQ74 426 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 MRPS16Q9Y3D3 137 aaKnown RBP4.06□□□□□ -1.76
CAPN3-217ENST00000567817 CADP27708 2225 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 DSCAML1Q8TD84 2053 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 TRRAPQ9Y4A5 3859 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 PLCE1Q9P212 2302 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 PRKDCP78527 4128 aaKnown RBP4.05□□□□□ -1.76
CAPN3-217ENST00000567817 A0A087X0K7 114 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 A0A1B0GUS0 222 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 RBAKDNA6NC62 111 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 GAGE10A6NGK3 116 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 F2Z2F3 143 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 NDUFS8O00217 210 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 MRPS12O15235 138 aaKnown RBP4.05□□□□□ -1.76
CAPN3-217ENST00000567817 TCAPO15273 167 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 IGLV2-11P01706 119 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV3-48P01763 117 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 IGLC3P0DOY3 106 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 TMEM11P17152 192 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 UBE2E1P51965 193 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 HNRNPA3P51991 378 aaKnown RBP4.05□□□□□ -1.76
CAPN3-217ENST00000567817 EFNA4P52798 201 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 ARF6P62330 175 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 KIAA1644Q3SXP7 199 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 GOLT1AQ6ZVE7 132 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 SPATA12Q7Z6I5 190 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 PRNTQ86SH4 94 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 Q8N976 141 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 ZNF418Q8TF45 676 aaPredicted RBP4.05□□□□□ -1.76
CAPN3-217ENST00000567817 GTSF1Q8WW33 167 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 MRPL53Q96EL3 112 aaKnown RBP4.05□□□□□ -1.76
CAPN3-217ENST00000567817 RCHY1Q96PM5 261 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 PMCHL2Q9BQD1 86 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 SLC50A1Q9BRV3 221 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 FAM103A1Q9BTL3 118 aaKnown RBP4.05□□□□□ -1.76
CAPN3-217ENST00000567817 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 MS4A6AQ9H2W1 248 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 RPH3ALQ9UNE2 315 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 LAMTOR2Q9Y2Q5 125 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 DOCK11Q5JSL3 2073 aa4.05□□□□□ -1.76
CAPN3-217ENST00000567817 KMT2CQ8NEZ4 4911 aaKnown RBP4.05□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV4-30-2A0A087WSY4 118 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV2-70DA0A0C4DH43 119 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 TMEM189A5PLL7 270 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 NCBP2LA6PVI3 153 aaKnown RBP4.04□□□□□ -1.76
CAPN3-217ENST00000567817 BUB3O43684 328 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 BRI3O95415 125 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 APOHP02749 345 aaPredicted RBP4.04□□□□□ -1.76
CAPN3-217ENST00000567817 PPBPP02775 128 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 SNRPCP09234 159 aaKnown RBP4.04□□□□□ -1.76
CAPN3-217ENST00000567817 FRMD6-AS1P0C7T7 363 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 NTF3P20783 257 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 CDKN1AP38936 164 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 RELQ04864 619 aaPredicted RBP4.04□□□□□ -1.76
CAPN3-217ENST00000567817 GDF5OSQ5U4N7 250 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 TCF24Q7RTU0 167 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 EXOC3-AS1Q8N2X6 119 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 PGLYRP4Q96LB8 373 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 HILPDAQ9Y5L2 63 aa4.04□□□□□ -1.76
CAPN3-217ENST00000567817 TRBV7-1A0A0A6YYK4 115 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV3-21A0A0B4J1V1 117 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV7-81A0A0B4J1V7 117 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 hDV102S1A0JD36 115 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 C2orf70A6NJV1 201 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 LYNX1G3V0Z9 82 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 SYS1-DBNDD2H3BUS1 97 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 IGKV3-20P01619 116 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 APELAP0DMC3 54 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 LYNX1P0DP58 116 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 SAMD13Q5VXD3 122 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 LEMD1Q68G75 181 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 LINC00322Q6ZN03 302 aaPredicted RBP4.03□□□□□ -1.76
CAPN3-217ENST00000567817 Q6ZN92 141 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 FA2HQ7L5A8 372 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 ORMDL3Q8N138 153 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 Q8N9W7 124 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 OR10AG1Q8NH19 301 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 EEF1AKMT3Q96AZ1 226 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 ZC2HC1AQ96GY0 325 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 CNFNQ9BYD5 112 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 SIRPDQ9H106 197 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 TET2Q6N021 2002 aaPredicted RBP4.03□□□□□ -1.76
CAPN3-217ENST00000567817 PRR14LQ5THK1 2151 aa4.03□□□□□ -1.76
CAPN3-217ENST00000567817 MALRD1Q5VYJ5 2156 aa4.02□□□□□ -1.77
CAPN3-217ENST00000567817 VWFP04275 2813 aa4.02□□□□□ -1.77
CAPN3-217ENST00000567817 TRAV8-1A0A0A6YYK1 113 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms