RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 C9orf139Q6ZV77 190 aa16.56■□□□□ 0.24
SPSB3-208ENST00000566339 SMIM2Q9BVW6 85 aa16.56■□□□□ 0.24
SPSB3-208ENST00000566339 TMEM160Q9NX00 188 aa16.56■□□□□ 0.24
SPSB3-208ENST00000566339 M0R381 172 aa16.55■□□□□ 0.24
SPSB3-208ENST00000566339 PPP1R17O96001 155 aa16.55■□□□□ 0.24
SPSB3-208ENST00000566339 GATA1P15976 413 aaPredicted RBP16.55■□□□□ 0.24
SPSB3-208ENST00000566339 UBE2E1P51965 193 aa16.55■□□□□ 0.24
SPSB3-208ENST00000566339 RIPPLY3P57055 190 aa16.55■□□□□ 0.24
SPSB3-208ENST00000566339 TCTAP57738 103 aa16.55■□□□□ 0.24
SPSB3-208ENST00000566339 NHP2Q9NX24 153 aaKnown RBP16.55■□□□□ 0.24
SPSB3-208ENST00000566339 FAM90A27PA6NNH2 459 aa16.54■□□□□ 0.24
SPSB3-208ENST00000566339 SPANXN1Q5VSR9 72 aa16.54■□□□□ 0.24
SPSB3-208ENST00000566339 TRGV3P03979 118 aa16.54■□□□□ 0.24
SPSB3-208ENST00000566339 GRNP28799 593 aaKnown RBP16.54■□□□□ 0.24
SPSB3-208ENST00000566339 C12orf74Q32Q52 190 aa16.54■□□□□ 0.24
SPSB3-208ENST00000566339 C8orf86Q6ZUL3 223 aa16.54■□□□□ 0.24
SPSB3-208ENST00000566339 LINC00477Q96M19 166 aa16.54■□□□□ 0.24
SPSB3-208ENST00000566339 CCDC140Q96MF4 163 aa16.54■□□□□ 0.24
SPSB3-208ENST00000566339 RNF182Q8N6D2 247 aa16.53■□□□□ 0.24
SPSB3-208ENST00000566339 TOMM6Q96B49 74 aa16.53■□□□□ 0.24
SPSB3-208ENST00000566339 ZNF479Q96JC4 524 aa16.53■□□□□ 0.24
SPSB3-208ENST00000566339 LRRK2Q5S007 2527 aa16.53■□□□□ 0.24
SPSB3-208ENST00000566339 TM4SF20Q53R12 229 aa16.52■□□□□ 0.24
SPSB3-208ENST00000566339 HECTD1Q9ULT8 2610 aa16.52■□□□□ 0.23
SPSB3-208ENST00000566339 TRBV7-3A0A075B6L6 115 aa16.51■□□□□ 0.23
SPSB3-208ENST00000566339 TRBV7-9A0A0J9YWB2 115 aa16.51■□□□□ 0.23
SPSB3-208ENST00000566339 ATP6V0E1O15342 81 aa16.51■□□□□ 0.23
SPSB3-208ENST00000566339 PPIFP30405 207 aaKnown RBP16.51■□□□□ 0.23
SPSB3-208ENST00000566339 ABCA1O95477 2261 aa16.51■□□□□ 0.23
SPSB3-208ENST00000566339 ANKHD1Q8IWZ3 2542 aaKnown RBP16.5■□□□□ 0.23
SPSB3-208ENST00000566339 MYMXA0A1B0GTQ4 84 aa16.5■□□□□ 0.23
SPSB3-208ENST00000566339 OR11H12B2RN74 326 aa16.5■□□□□ 0.23
SPSB3-208ENST00000566339 CRIP2P52943 208 aaPredicted RBP16.5■□□□□ 0.23
SPSB3-208ENST00000566339 ECSCRQ19T08 205 aa16.5■□□□□ 0.23
SPSB3-208ENST00000566339 MAPKAPK5-AS1Q8N8E1 139 aa16.5■□□□□ 0.23
SPSB3-208ENST00000566339 OR11H1Q8NG94 326 aa16.5■□□□□ 0.23
SPSB3-208ENST00000566339 OR11H2Q8NH07 326 aa16.5■□□□□ 0.23
SPSB3-208ENST00000566339 UFC1Q9Y3C8 167 aa16.5■□□□□ 0.23
SPSB3-208ENST00000566339 TEX48A0A1B0GUV7 120 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 FAM223BA6NKX1 122 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 OVOL1O14753 267 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 RPL24P83731 157 aaKnown RBP16.49■□□□□ 0.23
SPSB3-208ENST00000566339 RRN3P1Q2M238 152 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 CLEC19AQ6UXS0 136 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 FAM223AQ8IWN6 122 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 ITLN2Q8WWU7 325 aaPredicted RBP16.49■□□□□ 0.23
SPSB3-208ENST00000566339 TTTY13Q9BZ97 58 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 DPH3P1Q9H4G8 78 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 DOPEY2Q9Y3R5 2298 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 UTP20O75691 2785 aaKnown RBP16.49■□□□□ 0.23
SPSB3-208ENST00000566339 TRAV21A0A0B4J279 112 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 GNLYP22749 145 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 RPL32P62910 135 aaKnown RBP16.49■□□□□ 0.23
SPSB3-208ENST00000566339 NEXN-AS1Q8NBZ9 246 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 USP9XQ93008 2570 aaPredicted RBP16.49■□□□□ 0.23
SPSB3-208ENST00000566339 HIST1H4GQ99525 98 aa16.49■□□□□ 0.23
SPSB3-208ENST00000566339 CHTOPQ9Y3Y2 248 aaKnown RBP16.49■□□□□ 0.23
SPSB3-208ENST00000566339 SUMO2P61956 95 aaKnown RBP16.48■□□□□ 0.23
SPSB3-208ENST00000566339 ADORA2A-AS1P86434 159 aa16.48■□□□□ 0.23
SPSB3-208ENST00000566339 SPANXB1Q9NS25 103 aaPredicted RBP16.48■□□□□ 0.23
SPSB3-208ENST00000566339 K7ERJ3 54 aa16.47■□□□□ 0.23
SPSB3-208ENST00000566339 ATP5G2Q06055 141 aa16.47■□□□□ 0.23
SPSB3-208ENST00000566339 GLMPQ8WWB7 406 aa16.47■□□□□ 0.23
SPSB3-208ENST00000566339 AJUBAQ96IF1 538 aa16.47■□□□□ 0.23
SPSB3-208ENST00000566339 SCGB3A1Q96QR1 104 aa16.47■□□□□ 0.23
SPSB3-208ENST00000566339 PTPN13Q12923 2485 aa16.47■□□□□ 0.23
SPSB3-208ENST00000566339 NBPF19A0A087WUL8 3843 aa16.47■□□□□ 0.23
SPSB3-208ENST00000566339 TMEM238LA0A1B0GVL6 79 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 A6NJY4 79 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 CCL21O00585 134 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 BRI3O95415 125 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 CD300EQ496F6 205 aaPredicted RBP16.46■□□□□ 0.23
SPSB3-208ENST00000566339 SAMD13Q5VXD3 122 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 POM121L12Q8N7R1 296 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 C16orf92Q96LL3 132 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 SIGMAR1Q99720 223 aa16.46■□□□□ 0.23
SPSB3-208ENST00000566339 LY6HO94772 140 aa16.46■□□□□ 0.22
SPSB3-208ENST00000566339 PAPPA-AS1Q5QFB9 102 aa16.46■□□□□ 0.22
SPSB3-208ENST00000566339 APRG1Q8IVJ8 170 aa16.46■□□□□ 0.22
SPSB3-208ENST00000566339 IGHV1-69DA0A0B4J2H0 117 aa16.45■□□□□ 0.22
SPSB3-208ENST00000566339 IGHV3-35A0A0C4DH35 117 aa16.45■□□□□ 0.22
SPSB3-208ENST00000566339 ZFP36P26651 326 aaKnown RBP16.45■□□□□ 0.22
SPSB3-208ENST00000566339 CDSNQ15517 529 aa16.45■□□□□ 0.22
SPSB3-208ENST00000566339 CIDEAO60543 219 aa16.44■□□□□ 0.22
SPSB3-208ENST00000566339 SPATA25Q9BR10 227 aa16.44■□□□□ 0.22
SPSB3-208ENST00000566339 IGHV3OR16-8A0A075B7F1 116 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 H3BVH4 76 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 ASIPP42127 132 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 C19orf54Q5BKX5 351 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 HIVEP3Q5T1R4 2406 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 TRAV26-2A0A0B4J265 109 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 EFNA4P52798 201 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 GAGE13Q4V321 117 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 OR10J6PQ8NGY7 276 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 ATP6V0E2Q8NHE4 81 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 RASL10AQ92737 203 aa16.43■□□□□ 0.22
SPSB3-208ENST00000566339 ZFAND2AQ8N6M9 145 aa16.42■□□□□ 0.22
SPSB3-208ENST00000566339 C5orf56Q8N8D9 126 aa16.42■□□□□ 0.22
SPSB3-208ENST00000566339 FAM19A4Q96LR4 140 aa16.42■□□□□ 0.22
SPSB3-208ENST00000566339 ADGRG4Q8IZF6 3080 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms