RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 BCL2P10415 239 aa14.92□□□□□ -0.02
SHCBP1-205ENST00000566016 MEF2BQ02080 365 aaPredicted RBP14.92□□□□□ -0.02
SHCBP1-205ENST00000566016 LGALS9BQ3B8N2 356 aa14.91□□□□□ -0.02
SHCBP1-205ENST00000566016 C18orf15Q96N68 181 aa14.91□□□□□ -0.02
SHCBP1-205ENST00000566016 NAGKQ9UJ70 344 aa14.91□□□□□ -0.02
SHCBP1-205ENST00000566016 LCE6AA0A183 80 aa14.9□□□□□ -0.02
SHCBP1-205ENST00000566016 SPINK4O60575 86 aa14.9□□□□□ -0.02
SHCBP1-205ENST00000566016 ATP5G1P05496 136 aa14.9□□□□□ -0.02
SHCBP1-205ENST00000566016 TMEM183AQ8IXX5 376 aa14.9□□□□□ -0.02
SHCBP1-205ENST00000566016 SDF2L1Q9HCN8 221 aa14.9□□□□□ -0.02
SHCBP1-205ENST00000566016 IGLL5B9A064 214 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 PDE6DO43924 150 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 VAX2Q9UIW0 290 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 IGHV4-4A0A075B6R2 117 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 FABP5P3A8MUU1 101 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 Q6ZTI0 123 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 ZC2HC1AQ96GY0 325 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 SPXQ9BT56 116 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 MDFICQ9P1T7 246 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 C11orf21Q9P2W6 132 aa14.89□□□□□ -0.03
SHCBP1-205ENST00000566016 IGHV3-16A0A0C4DH30 117 aa14.88□□□□□ -0.03
SHCBP1-205ENST00000566016 TYMSP04818 313 aa14.88□□□□□ -0.03
SHCBP1-205ENST00000566016 APLNQ9ULZ1 77 aa14.88□□□□□ -0.03
SHCBP1-205ENST00000566016 GAGE12BA1L429 117 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 GAGE7O76087 117 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 GAGE12FP0CL80 117 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 GAGE12GP0CL81 117 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 GAGE12IP0CL82 117 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 HTN3P15516 51 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 NDUFAF3Q9BU61 184 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 ALMS1Q8TCU4 4167 aa14.87□□□□□ -0.03
SHCBP1-205ENST00000566016 TRGV1A0A0A0MS02 117 aa14.86□□□□□ -0.03
SHCBP1-205ENST00000566016 RPL35P42766 123 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-205ENST00000566016 FAM162BQ5T6X4 162 aa14.86□□□□□ -0.03
SHCBP1-205ENST00000566016 MLST8Q9BVC4 326 aa14.86□□□□□ -0.03
SHCBP1-205ENST00000566016 SACSQ9NZJ4 4579 aa14.86□□□□□ -0.03
SHCBP1-205ENST00000566016 GNRH2O43555 120 aa14.85□□□□□ -0.03
SHCBP1-205ENST00000566016 CRIP1P50238 77 aa14.85□□□□□ -0.03
SHCBP1-205ENST00000566016 ZNF674Q2M3X9 581 aa14.85□□□□□ -0.03
SHCBP1-205ENST00000566016 TEX261Q6UWH6 196 aa14.85□□□□□ -0.03
SHCBP1-205ENST00000566016 LINC00476Q8WZB0 136 aa14.85□□□□□ -0.03
SHCBP1-205ENST00000566016 DNAH1Q9P2D7 4330 aa14.84□□□□□ -0.03
SHCBP1-205ENST00000566016 BAGE2Q86Y30 109 aa14.84□□□□□ -0.03
SHCBP1-205ENST00000566016 RASL10AQ92737 203 aa14.84□□□□□ -0.03
SHCBP1-205ENST00000566016 TRGV2A0A075B6R0 118 aa14.83□□□□□ -0.03
SHCBP1-205ENST00000566016 SMIM12Q96EX1 92 aa14.83□□□□□ -0.03
SHCBP1-205ENST00000566016 DERL1Q9BUN8 251 aa14.83□□□□□ -0.03
SHCBP1-205ENST00000566016 IGKV3D-20A0A0C4DH25 116 aa14.82□□□□□ -0.04
SHCBP1-205ENST00000566016 F5H768 121 aa14.82□□□□□ -0.04
SHCBP1-205ENST00000566016 SH2D1AO60880 128 aa14.82□□□□□ -0.04
SHCBP1-205ENST00000566016 TMEM88Q6PEY1 159 aa14.82□□□□□ -0.04
SHCBP1-205ENST00000566016 MRPL16Q9NX20 251 aaKnown RBP14.82□□□□□ -0.04
SHCBP1-205ENST00000566016 M0R2P5 195 aa14.82□□□□□ -0.04
SHCBP1-205ENST00000566016 LGALS9CQ6DKI2 356 aa14.82□□□□□ -0.04
SHCBP1-205ENST00000566016 NACAE9PAV3 2078 aa14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 RBFOX3A6NFN3 312 aa14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 NDUFS6O75380 124 aaKnown RBP14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 LINC01559Q495D7 138 aa14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 ZNF506Q5JVG8 444 aa14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 C15orf53Q8NAA6 179 aa14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 NHLRC2Q8NBF2 726 aa14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 C9orf85Q96MD7 179 aa14.81□□□□□ -0.04
SHCBP1-205ENST00000566016 B4DEV8 164 aa14.8□□□□□ -0.04
SHCBP1-205ENST00000566016 TMEM250H0YL14 139 aa14.8□□□□□ -0.04
SHCBP1-205ENST00000566016 ORM1P02763 201 aa14.8□□□□□ -0.04
SHCBP1-205ENST00000566016 CENPWQ5EE01 88 aa14.8□□□□□ -0.04
SHCBP1-205ENST00000566016 DNLZQ5SXM8 178 aa14.8□□□□□ -0.04
SHCBP1-205ENST00000566016 MED9Q9NWA0 146 aa14.8□□□□□ -0.04
SHCBP1-205ENST00000566016 KRBOX1C9JBD0 128 aa14.79□□□□□ -0.04
SHCBP1-205ENST00000566016 RNASE3P12724 160 aaKnown RBP14.79□□□□□ -0.04
SHCBP1-205ENST00000566016 PTH2Q96A98 100 aa14.79□□□□□ -0.04
SHCBP1-205ENST00000566016 H3BNG1 76 aa14.78□□□□□ -0.04
SHCBP1-205ENST00000566016 HOXA5P20719 270 aa14.78□□□□□ -0.04
SHCBP1-205ENST00000566016 ASIPP42127 132 aa14.78□□□□□ -0.04
SHCBP1-205ENST00000566016 FAM210AQ96ND0 272 aa14.78□□□□□ -0.04
SHCBP1-205ENST00000566016 TRBV20OR9-2A0A075B6H5 130 aa14.77□□□□□ -0.04
SHCBP1-205ENST00000566016 GNG4P50150 75 aa14.77□□□□□ -0.04
SHCBP1-205ENST00000566016 PIK3CD-AS1Q5SR53 167 aa14.77□□□□□ -0.04
SHCBP1-205ENST00000566016 IL36BQ9NZH7 164 aa14.77□□□□□ -0.04
SHCBP1-205ENST00000566016 RYR3Q15413 4870 aa14.77□□□□□ -0.05
SHCBP1-205ENST00000566016 RYR2Q92736 4967 aa14.77□□□□□ -0.05
SHCBP1-205ENST00000566016 M0R036 132 aa14.76□□□□□ -0.05
SHCBP1-205ENST00000566016 LY6G6CO95867 125 aa14.76□□□□□ -0.05
SHCBP1-205ENST00000566016 IGLV2-8P01709 118 aa14.76□□□□□ -0.05
SHCBP1-205ENST00000566016 S100A4P26447 101 aaKnown RBP14.76□□□□□ -0.05
SHCBP1-205ENST00000566016 CXCL1P09341 107 aa14.76□□□□□ -0.05
SHCBP1-205ENST00000566016 OR5I1Q13606 314 aa14.76□□□□□ -0.05
SHCBP1-205ENST00000566016 TOR2AQ5JU69 321 aa14.76□□□□□ -0.05
SHCBP1-205ENST00000566016 TRAV4A0A0B4J268 109 aa14.75□□□□□ -0.05
SHCBP1-205ENST00000566016 C9JCJ5 164 aa14.75□□□□□ -0.05
SHCBP1-205ENST00000566016 P0DMU3 169 aa14.75□□□□□ -0.05
SHCBP1-205ENST00000566016 FAM231AP0DMU4 169 aa14.75□□□□□ -0.05
SHCBP1-205ENST00000566016 FAM231CP0DMU5 169 aa14.75□□□□□ -0.05
SHCBP1-205ENST00000566016 ZNF876PQ49A33 203 aa14.75□□□□□ -0.05
SHCBP1-205ENST00000566016 ZNF575Q86XF7 245 aa14.75□□□□□ -0.05
SHCBP1-205ENST00000566016 VPS13DQ5THJ4 4388 aa14.74□□□□□ -0.05
SHCBP1-205ENST00000566016 TRAV26-1A0A087WT03 109 aa14.74□□□□□ -0.05
SHCBP1-205ENST00000566016 RAB19A4D1S5 217 aa14.74□□□□□ -0.05
SHCBP1-205ENST00000566016 SLAQ13239 276 aa14.74□□□□□ -0.05
SHCBP1-205ENST00000566016 PRR27Q6MZM9 219 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms