RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CEND1Q8N111 149 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 SPTAN1Q13813 2472 aaKnown RBP10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 SPRY2O43597 315 aa10.71□□□□□ -0.69
CX3CL1-204ENST00000565912 Q6ZWC4 215 aa10.71□□□□□ -0.69
CX3CL1-204ENST00000565912 IGLC2P0DOY2 106 aa10.71□□□□□ -0.69
CX3CL1-204ENST00000565912 IGLC3P0DOY3 106 aa10.71□□□□□ -0.69
CX3CL1-204ENST00000565912 CFPP27918 469 aa10.71□□□□□ -0.69
CX3CL1-204ENST00000565912 K7ERJ3 54 aa10.71□□□□□ -0.7
CX3CL1-204ENST00000565912 PLXNA4Q9HCM2 1894 aa10.71□□□□□ -0.7
CX3CL1-204ENST00000565912 IGLL1P15814 213 aa10.71□□□□□ -0.7
CX3CL1-204ENST00000565912 C5orf38Q86SI9 138 aa10.71□□□□□ -0.7
CX3CL1-204ENST00000565912 RS1O15537 224 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 SLURP1P55000 103 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 DKK2Q9UBU2 259 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 PTPRDP23468 1912 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 AGPAT4-IT1Q9H0P7 198 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 WNK2Q9Y3S1 2297 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 Q9H8V8 135 aa10.7□□□□□ -0.7
CX3CL1-204ENST00000565912 PRSS33Q8NF86 280 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 SHISA9B4DS77 424 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 F8W1H4 67 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 NBL1P41271 181 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 C9orf66Q5T8R8 295 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 IGLV10-54A0A075B6I4 117 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 PRB1P04280 392 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 GP9P14770 177 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV3-30P01768 117 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV3-33P01772 117 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV2-70P01814 119 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV3-30-3P0DP02 117 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV3-30-5P0DP03 117 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 DEFB113Q30KQ7 82 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 FRMPD3Q5JV73 1810 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 SLC25A29Q8N8R3 303 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 ZNF524Q96C55 264 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 DOCK8Q8NF50 2099 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 LTAP01374 205 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 EGR2P11161 476 aaPredicted RBP10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 RSPO1Q2MKA7 263 aaPredicted RBP10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 CAMK2N2Q96S95 79 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 TRAV4A0A0B4J268 109 aa10.68□□□□□ -0.7
CX3CL1-204ENST00000565912 K7EP34 96 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 GYPEP15421 78 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 ZNF503Q96F45 646 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 H3BMG7 143 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 TRACP01848 142 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 ESM1Q9NQ30 184 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV4-61A0A0C4DH41 118 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV4-38-2P0DP08 117 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 CRYBA4P53673 196 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 CCL18P55774 89 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 ZNF493Q6ZR52 646 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 IFITM1P13164 125 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 TIRAPP58753 221 aa10.67□□□□□ -0.7
CX3CL1-204ENST00000565912 IGLC7A0M8Q6 106 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 A0A1W2PPM0 123 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 ICOSQ9Y6W8 199 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 GPR179Q6PRD1 2367 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 C15orf53Q8NAA6 179 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 ORMDL1Q9P0S3 153 aa10.66□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV4-30-2A0A087WSY4 118 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 IGHV4-28A0A0C4DH34 117 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 MYLKQ15746 1914 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 K7EP13 123 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 ANKRD29Q8N6D5 301 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 ANAPC1Q9H1A4 1944 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 PRR20EP86478 221 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 PRR20CP86479 221 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 PRR20DP86480 221 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 PRR20BP86481 221 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 PRR20AP86496 221 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 CLPSL1A2RUU4 121 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 ATP5G1P05496 136 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 ATP6V0E2Q8NHE4 81 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 C11orf52Q96A22 123 aa10.65□□□□□ -0.7
CX3CL1-204ENST00000565912 BAALC-AS2P0C853 105 aa10.65□□□□□ -0.71
CX3CL1-204ENST00000565912 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.71
CX3CL1-204ENST00000565912 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 SPANXA1Q9NS26 97 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 K7EN84 100 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 C12orf74Q32Q52 190 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 BLCAPP62952 87 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 POU2AF1Q16633 256 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 PIP4P1Q86T03 277 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 AJUBAQ96IF1 538 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 DOCK9Q9BZ29 2069 aa10.64□□□□□ -0.71
CX3CL1-204ENST00000565912 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 CFC1P0CG37 223 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms