RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SEC11AP67812 179 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 HIST1H1AQ02539 215 aaPredicted RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 TDRG1Q3Y452 100 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 SLC25A34Q6PIV7 304 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 ZCCHC24Q8N2G6 241 aaKnown RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 NUP35Q8NFH5 326 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 OR1N2Q8NGR9 330 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 MRAPQ8TCY5 172 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 MAP1LC3CQ9BXW4 147 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 RNASE7Q9H1E1 156 aaKnown RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 C16orf95Q9H693 158 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 JPT2Q9H910 190 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 Q9HAA7 133 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 TMEM14CQ9P0S9 112 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 EPDR1Q9UM22 224 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 IGHV1-18A0A0C4DH31 117 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 SERTM2A0A1B0GWG4 89 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 DEFA4P12838 97 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 ZNF137PP52743 207 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 VMA21Q3ZAQ7 101 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 LYPD1Q8N2G4 141 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 DEFB125Q8N687 156 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 OR4C5Q8NGB2 326 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 OR4C13Q8NGP0 309 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 TNFRSF14Q92956 283 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 MALRD1Q5VYJ5 2156 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 C19orf71A6NCJ1 209 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 HIGD1CA8MV81 97 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 F2Z2F3 143 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 SYS1-DBNDD2H3BUS1 97 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 SIVA1O15304 175 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 LEPROTL1O95214 131 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 LTAP01374 205 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 P01737 135 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 CRYGCP07315 174 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 CT45A6P0DMU7 189 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 CT45A5P0DMU8 189 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 CT45A7P0DMV0 189 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 NTF3P20783 257 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 S100A7P31151 101 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 ARF6P62330 175 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 RBX1P62877 108 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 SLAQ13239 276 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 TNXAQ16473 311 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 LYG1Q8N1E2 194 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 FXYD5Q96DB9 178 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 OTORQ9NRC9 128 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 ZNF355PQ9NSJ1 428 aa3.11□□□□□ -1.91
LINC00561-201ENST00000565815 OR4C46A6NHA9 309 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 K7EQM0 130 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 K7ERU9 68 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 FSTL3O95633 263 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 SAA1P0DJI8 122 aaPredicted RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 IGLL1P15814 213 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 CSN1S1P47710 185 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 FXYD3Q14802 87 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 TMEM155Q4W5P6 130 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 KIAA2026Q5HYC2 2103 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 LINC01545Q5VT33 79 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 RNASEKQ6P5S7 137 aaKnown RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 LINC01561Q8N1V8 128 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 FLYWCH2Q96CP2 140 aaKnown RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 GAFA1Q96PS6 74 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 RNF5Q99942 180 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 PEF1Q9UBV8 284 aaKnown RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 WASHC3Q9Y3C0 194 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 MXRA5Q9NR99 2828 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 IGKV1OR2-108A0A075B7D4 117 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 LOC102724200A0A096LPH7 203 aaPredicted RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 A6NDN8 102 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 CHEK1O14757 476 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 CCL25O15444 150 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 SLC25A5P05141 298 aaKnown RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 CT45A10P0DMU9 189 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 SAA4P35542 130 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 TCL1AP56279 114 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 Q56UQ5 140 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 EBLN2Q6P2I7 272 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 GTF2H5Q6ZYL4 71 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 VKORC1L1Q8N0U8 176 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 TPRX1Q8N7U7 411 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 TMEM75Q8N9X5 138 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 OR9G4Q8NGQ1 327 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 OR10AG1Q8NH19 301 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 H1FXQ92522 213 aaKnown RBP3.1□□□□□ -1.91
LINC00561-201ENST00000565815 HINT2Q9BX68 163 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 PPIAL4AQ9Y536 164 aa3.1□□□□□ -1.91
LINC00561-201ENST00000565815 TCRAP04437 139 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 NBEAP1P0C6P0 100 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 TFPI2P48307 235 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 HINT1P49773 126 aaPredicted RBP3.09□□□□□ -1.91
LINC00561-201ENST00000565815 TNFAIP6P98066 277 aaPredicted RBP3.09□□□□□ -1.91
LINC00561-201ENST00000565815 VAMP3Q15836 100 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 LTC4SQ16873 150 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 BVES-AS1Q5T3Y7 98 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 TCF24Q7RTU0 167 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 OR9G1Q8NH87 305 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 PIFOQ8TCI5 191 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 269.8 ms