RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 C9orf118A6NHY6 69 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 BOLA2-SMG1P6H3BVE0 249 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 HMGB3O15347 200 aaKnown RBP7.62□□□□□ -1.19
CAPN3-215ENST00000565559 EIF3GO75821 320 aaKnown RBP eCLIP7.62□□□□□ -1.19
CAPN3-215ENST00000565559 GCHFRP30047 84 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 CSN1S1P47710 185 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 CD300CQ08708 224 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 ZNF726P1Q15940 193 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 ZFP69Q49AA0 526 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 FAM74A1Q5RGS3 127 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 C9orf47Q6ZRZ4 202 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 RXFP4Q8TDU9 374 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 IGF2BP2-AS1Q96M15 143 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 ODF3Q96PU9 254 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 OTORQ9NRC9 128 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 PPP1R14DQ9NXH3 145 aa7.62□□□□□ -1.19
CAPN3-215ENST00000565559 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
CAPN3-215ENST00000565559 IGLV5-52A0A0A0MRZ9 124 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 RBAKDNA6NC62 111 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 SLC25A5P05141 298 aaKnown RBP7.61□□□□□ -1.19
CAPN3-215ENST00000565559 TSPOP30536 169 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 OR5I1Q13606 314 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 ESRGQ1W209 222 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 EIF5AL1Q6IS14 154 aaKnown RBP7.61□□□□□ -1.19
CAPN3-215ENST00000565559 DPPA3Q6W0C5 159 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 SLC51BQ86UW2 128 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 C9orf62Q8N4C0 152 aa7.61□□□□□ -1.19
CAPN3-215ENST00000565559 TRAV26-1A0A087WT03 109 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 PGPA6NDG6 321 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 M0R2Z0 102 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 CRXO43186 299 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-215ENST00000565559 CDKN1BP46527 198 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 SPINK13Q1W4C9 94 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 CMTM2Q8TAZ6 248 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 MBD3L1Q8WWY6 194 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 C20orf144Q9BQM9 153 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
CAPN3-215ENST00000565559 TRBV7-9A0A0J9YWB2 115 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 A0A1W2PRE2 83 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 MAP1LC3B2A6NCE7 125 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 ZNF705GA8MUZ8 300 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-215ENST00000565559 DIRC3C9JPN6 131 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 SIVA1O15304 175 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 INSP01308 110 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 NMBP08949 121 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 CT45A10P0DMU9 189 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 PRB4P10163 310 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-215ENST00000565559 LEPP41159 167 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 RAB5CP51148 216 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 TMEM78Q5T7P6 136 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 TMEM256Q8N2U0 113 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 TMED6Q8WW62 240 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 FAM19A4Q96LR4 140 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 NKX6-2Q9C056 277 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-215ENST00000565559 MAP1LC3BQ9GZQ8 125 aa7.59□□□□□ -1.19
CAPN3-215ENST00000565559 IGKV2-40A0A087WW87 121 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-215ENST00000565559 A0A0J9YY99 117 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 SERTM2A0A1B0GWG4 89 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 IGKV2D-40P01614 121 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-215ENST00000565559 CRISP2P16562 243 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 FHITP49789 147 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 ZNF138P52744 262 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 ERCC8Q13216 396 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 C5orf17Q8NAS9 161 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 FAM213BQ8TBF2 198 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-215ENST00000565559 VGLL1Q99990 258 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 TMPRSS5Q9H3S3 457 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 LENEPQ9Y5L5 61 aa7.58□□□□□ -1.2
CAPN3-215ENST00000565559 TRAV12-2A0A075B6T6 113 aa7.57□□□□□ -1.2
CAPN3-215ENST00000565559 SULT1A2P50226 295 aa7.57□□□□□ -1.2
CAPN3-215ENST00000565559 FGF8P55075 233 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-215ENST00000565559 IQCF2Q8IXL9 164 aa7.57□□□□□ -1.2
CAPN3-215ENST00000565559 SFT2D1Q8WV19 159 aa7.57□□□□□ -1.2
CAPN3-215ENST00000565559 ARL2-SNX15V9GYD0 113 aa7.57□□□□□ -1.2
CAPN3-215ENST00000565559 TRAV1-1A0A0B4J248 108 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 KLLNB2CW77 178 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 GGTLC3B5MD39 225 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 H3BNG1 76 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 K7EQM0 130 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 TCRAP04437 139 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 GFI1BQ5VTD9 330 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 FAT3Q8TDW7 4589 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 LRP2P98164 4655 aa7.56□□□□□ -1.2
CAPN3-215ENST00000565559 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 FBLL1A6NHQ2 334 aaKnown RBP7.55□□□□□ -1.2
CAPN3-215ENST00000565559 FAM74A7A6NL05 159 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 H7BYZ3 331 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 PRM2P04554 102 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 GPX1P07203 203 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 PPT1P50897 306 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 TAS2R60P59551 318 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 GOLT1AQ6ZVE7 132 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 ZFAND2AQ8N6M9 145 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 LINC01587Q99440 93 aa7.55□□□□□ -1.2
CAPN3-215ENST00000565559 TIMM8BQ9Y5J9 83 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-215ENST00000565559 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms