RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 H3BTX0 84 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 INSP01308 110 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 NMBP08949 121 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 SNRPCP09234 159 aaKnown RBP6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 TAGLN2P37802 199 aaKnown RBP6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 NKX2-5P52952 324 aaPredicted RBP6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 SUMO1P63165 101 aaKnown RBP6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 EXOC3-AS1Q8N2X6 119 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 C5orf17Q8NAS9 161 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 LINC01587Q99440 93 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 PLAC8L1A1L4L8 177 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 DIRC3C9JPN6 131 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 K7EP13 123 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 IFNA7P01567 189 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 CNN1P51911 297 aaKnown RBP6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 HIST1H1AQ02539 215 aaPredicted RBP6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 TMEM78Q5T7P6 136 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 TEX261Q6UWH6 196 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 IQCF2Q8IXL9 164 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 HIST1H2BAQ96A08 127 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 C20orf144Q9BQM9 153 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 NOP10Q9NPE3 64 aaKnown RBP6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 MANBALQ9NQG1 85 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 EPDR1Q9UM22 224 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
VPS9D1-205ENST00000565452 FAM74A7A6NL05 159 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 F6UB75 175 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 M0R3E3 92 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 NXPH4O95158 308 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 IFNA1P01562 189 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 S100A9P06702 114 aaKnown RBP6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 HTN1P15515 57 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 CDKN1BP46527 198 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 FGF8P55075 233 aaPredicted RBP6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 ALKAL2Q6UX46 152 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 ZNF493Q6ZR52 646 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 TMEM256Q8N2U0 113 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 LYPD6BQ8NI32 183 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 C16orf74Q96GX8 76 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 TMPRSS5Q9H3S3 457 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 MSRB1Q9NZV6 116 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 LRP2P98164 4655 aa6.12□□□□□ -1.43
VPS9D1-205ENST00000565452 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 PRAC2D3DTV9 90 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 BOLA2-SMG1P6H3BVE0 249 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 NDUFS6O75380 124 aaKnown RBP6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 EIF3GO75821 320 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 LEPP41159 167 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 ASIPP42127 132 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 ZNF138P52744 262 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 TAS2R60P59551 318 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 CST9LP1Q5W188 147 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 CCDC28AQ8IWP9 274 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 ZNF680Q8NEM1 530 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 AGPAT4-IT1Q9H0P7 198 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 ZNF492Q9P255 531 aa6.11□□□□□ -1.43
VPS9D1-205ENST00000565452 CRXO43186 299 aaPredicted RBP6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 PSCAO43653 123 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 PAGE4O60829 102 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 TCRAP04437 139 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 CT45A10P0DMU9 189 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 CRISP2P16562 243 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 HOXA5P20719 270 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 SPINK13Q1W4C9 94 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 SAPCD1Q5SSQ6 148 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 CYB561D1Q8N8Q1 229 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 TMEM75Q8N9X5 138 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 LY96Q9Y6Y9 160 aa6.1□□□□□ -1.43
VPS9D1-205ENST00000565452 A0A096LPF7 62 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 TRBV6-1A0A0K0K1D8 114 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 GGTLC3B5MD39 225 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 M0R2Z0 102 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 RS1O15537 224 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 PDE6DO43924 150 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 GPX1P07203 203 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 PRB4P10163 310 aaPredicted RBP6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 EVI2AP22794 236 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 UBE2G2P60604 165 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 GOLT1AQ6ZVE7 132 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 VGLL1Q99990 258 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 NDFIP1Q9BT67 221 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 VAX2Q9UIW0 290 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 ZFP30Q9Y2G7 519 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 KLF12Q9Y4X4 402 aa6.09□□□□□ -1.43
VPS9D1-205ENST00000565452 IGKV2-40A0A087WW87 121 aaPredicted RBP6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 GAGE12BA1L429 117 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 LRCOL1A6NCL2 159 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 KLLNB2CW77 178 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 H7BYZ3 331 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 PEX7O00628 323 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 GAGE7O76087 117 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 IGKV2D-40P01614 121 aaPredicted RBP6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 GAGE12FP0CL80 117 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 GAGE12GP0CL81 117 aa6.08□□□□□ -1.44
VPS9D1-205ENST00000565452 GAGE12IP0CL82 117 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms