RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 H3BVH4 76 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 SPRY2O43597 315 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 UCNP55089 124 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 ZC2HC1BQ5TFG8 222 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 TMEM160Q9NX00 188 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-205ENST00000564747 DPM2O94777 84 aa11.8□□□□□ -0.52
GTF3C1-205ENST00000564747 LAGE3Q14657 143 aa11.8□□□□□ -0.52
GTF3C1-205ENST00000564747 HIF1ANQ9NWT6 349 aa11.8□□□□□ -0.52
GTF3C1-205ENST00000564747 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-205ENST00000564747 TRAV41A0A0B4J266 112 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 ATP5LO75964 103 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 DEFB1P60022 68 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 SPTAN1Q13813 2472 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 K7ERJ3 54 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 UNQ9165/PRO28630Q6UXU0 137 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
GTF3C1-205ENST00000564747 PRSS47A8MTI9 375 aa11.78□□□□□ -0.52
GTF3C1-205ENST00000564747 SMPXQ9UHP9 88 aa11.78□□□□□ -0.52
GTF3C1-205ENST00000564747 BRD3OSQ6XYD6 125 aa11.78□□□□□ -0.52
GTF3C1-205ENST00000564747 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-205ENST00000564747 TEX48A0A1B0GUV7 120 aa11.77□□□□□ -0.53
GTF3C1-205ENST00000564747 ARL3P36405 182 aa11.77□□□□□ -0.53
GTF3C1-205ENST00000564747 GPHB5Q86YW7 130 aa11.77□□□□□ -0.53
GTF3C1-205ENST00000564747 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-205ENST00000564747 SRSF1Q07955 248 aaKnown RBP eCLIP11.77□□□□□ -0.53
GTF3C1-205ENST00000564747 C19orf54Q5BKX5 351 aa11.77□□□□□ -0.53
GTF3C1-205ENST00000564747 MOB4Q9Y3A3 225 aa11.77□□□□□ -0.53
GTF3C1-205ENST00000564747 K7EMI3 77 aa11.76□□□□□ -0.53
GTF3C1-205ENST00000564747 M0R381 172 aa11.76□□□□□ -0.53
GTF3C1-205ENST00000564747 LY6DQ14210 128 aa11.76□□□□□ -0.53
GTF3C1-205ENST00000564747 C9orf139Q6ZV77 190 aa11.76□□□□□ -0.53
GTF3C1-205ENST00000564747 CEND1Q8N111 149 aa11.76□□□□□ -0.53
GTF3C1-205ENST00000564747 MAPKAPK5-AS1Q8N8E1 139 aa11.76□□□□□ -0.53
GTF3C1-205ENST00000564747 ABCA2Q9BZC7 2435 aa11.76□□□□□ -0.53
GTF3C1-205ENST00000564747 FAM223BA6NKX1 122 aa11.75□□□□□ -0.53
GTF3C1-205ENST00000564747 FAM223AQ8IWN6 122 aa11.75□□□□□ -0.53
GTF3C1-205ENST00000564747 ZFAND2AQ8N6M9 145 aa11.75□□□□□ -0.53
GTF3C1-205ENST00000564747 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-205ENST00000564747 TM2D2Q9BX73 214 aa11.75□□□□□ -0.53
GTF3C1-205ENST00000564747 A0A087WX48 190 aa11.74□□□□□ -0.53
GTF3C1-205ENST00000564747 C19orf84I3L1E1 186 aa11.74□□□□□ -0.53
GTF3C1-205ENST00000564747 KLK15Q9H2R5 256 aa11.74□□□□□ -0.53
GTF3C1-205ENST00000564747 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
GTF3C1-205ENST00000564747 IGHV3-11P01762 117 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 MRAP2Q96G30 205 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 LENEPQ9Y5L5 61 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 IGKV3-7A0A075B6H7 116 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 F6UB75 175 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 RPL11P62913 178 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 C14orf178Q8N769 122 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 ITPR1Q14643 2758 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 LY6EQ16553 131 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 RASL10AQ92737 203 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 RPL39LQ96EH5 51 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
GTF3C1-205ENST00000564747 IGHV1-69DA0A0B4J2H0 117 aa11.72□□□□□ -0.53
GTF3C1-205ENST00000564747 SOCS3O14543 225 aa11.72□□□□□ -0.53
GTF3C1-205ENST00000564747 IGHV1-69P01742 117 aa11.72□□□□□ -0.53
GTF3C1-205ENST00000564747 IGHV4-39P01824 125 aa11.72□□□□□ -0.53
GTF3C1-205ENST00000564747 ANXA2RQ3ZCQ2 193 aa11.72□□□□□ -0.53
GTF3C1-205ENST00000564747 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
GTF3C1-205ENST00000564747 AGRNO00468 2067 aa11.71□□□□□ -0.53
GTF3C1-205ENST00000564747 TRAV21A0A0B4J279 112 aa11.71□□□□□ -0.53
GTF3C1-205ENST00000564747 E9PLD3 99 aa11.71□□□□□ -0.53
GTF3C1-205ENST00000564747 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-205ENST00000564747 SUMO2P61956 95 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-205ENST00000564747 LCNL1Q6ZST4 164 aa11.71□□□□□ -0.53
GTF3C1-205ENST00000564747 IGLL5B9A064 214 aa11.71□□□□□ -0.54
GTF3C1-205ENST00000564747 NDUFA4O00483 81 aa11.71□□□□□ -0.54
GTF3C1-205ENST00000564747 GNRH2O43555 120 aa11.71□□□□□ -0.54
GTF3C1-205ENST00000564747 CRIP2P52943 208 aaPredicted RBP11.71□□□□□ -0.54
GTF3C1-205ENST00000564747 ZNF479Q96JC4 524 aa11.71□□□□□ -0.54
GTF3C1-205ENST00000564747 PHLDA3Q9Y5J5 127 aa11.71□□□□□ -0.54
GTF3C1-205ENST00000564747 CELSR2Q9HCU4 2923 aa11.7□□□□□ -0.54
GTF3C1-205ENST00000564747 FOXI2Q6ZQN5 318 aa11.7□□□□□ -0.54
GTF3C1-205ENST00000564747 F8W1H4 67 aa11.7□□□□□ -0.54
GTF3C1-205ENST00000564747 OVOL1O14753 267 aa11.7□□□□□ -0.54
GTF3C1-205ENST00000564747 PLNP26678 52 aa11.7□□□□□ -0.54
GTF3C1-205ENST00000564747 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
GTF3C1-205ENST00000564747 H7C1H1 209 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 IGHV4-38-2P0DP08 117 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 ASIPP42127 132 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 TAL2Q16559 108 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 GTSF1LQ9H1H1 148 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 DPH3P1Q9H4G8 78 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 F8VRH5 84 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 J3QR89 54 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 CIDEAO60543 219 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 790.6 ms