RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 IGKV3D-20A0A0C4DH25 116 aa12.58□□□□□ -0.4
CCNF-204ENST00000564333 LINC01546A6NGU7 62 aa12.58□□□□□ -0.4
CCNF-204ENST00000564333 BOD1L2Q8IYS8 172 aa12.58□□□□□ -0.4
CCNF-204ENST00000564333 IFI27L1Q96BM0 104 aa12.58□□□□□ -0.4
CCNF-204ENST00000564333 MAP1LC3AQ9H492 121 aa12.58□□□□□ -0.4
CCNF-204ENST00000564333 SPG11Q96JI7 2443 aa12.57□□□□□ -0.4
CCNF-204ENST00000564333 IGHV7-4-1A0A0J9YVY3 117 aa12.57□□□□□ -0.4
CCNF-204ENST00000564333 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
CCNF-204ENST00000564333 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
CCNF-204ENST00000564333 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
CCNF-204ENST00000564333 CR1P17927 2039 aa12.57□□□□□ -0.4
CCNF-204ENST00000564333 FASNP49327 2511 aaKnown RBP12.57□□□□□ -0.4
CCNF-204ENST00000564333 NCR2O95944 276 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 FGF6P10767 208 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 KRTAP10-9P60411 292 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 HSD52Q0P140 79 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 FOXE3Q13461 319 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
CCNF-204ENST00000564333 DAZ1Q9NQZ3 744 aaKnown RBP12.56□□□□□ -0.4
CCNF-204ENST00000564333 C7orf71A4D174 169 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 CBY3A6NI87 242 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 PSMB8P28062 276 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 TM4SF20Q53R12 229 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 AP1S3Q96PC3 154 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 RHPN1-AS1Q9BWJ2 59 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 LENEPQ9Y5L5 61 aa12.56□□□□□ -0.4
CCNF-204ENST00000564333 H3BRM9 83 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 OVOL1O14753 267 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 FSHBP01225 129 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 RPL11P62913 178 aaKnown RBP12.55□□□□□ -0.4
CCNF-204ENST00000564333 AMMECR1LQ6DCA0 310 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 GTF2H5Q6ZYL4 71 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 OR10J6PQ8NGY7 276 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 BEX4Q9NWD9 120 aaPredicted RBP12.55□□□□□ -0.4
CCNF-204ENST00000564333 MSRB1Q9NZV6 116 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 TP73-AS1Q9UF72 201 aa12.55□□□□□ -0.4
CCNF-204ENST00000564333 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 CACNG7P62955 275 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 PRR9Q5T870 116 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 CELSR2Q9HCU4 2923 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 A6NJY4 79 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 J3QKU1 62 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 DEFB113Q30KQ7 82 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 FAM106AQ4KMX7 169 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 Q5PR19 223 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 RNF185Q96GF1 192 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 VPREB3Q9UKI3 123 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 FBN2P35556 2912 aa12.54□□□□□ -0.4
CCNF-204ENST00000564333 ANKRD17O75179 2603 aaKnown RBP12.53□□□□□ -0.4
CCNF-204ENST00000564333 CRYBG3Q68DQ2 2970 aa12.53□□□□□ -0.4
CCNF-204ENST00000564333 NPYP01303 97 aa12.53□□□□□ -0.4
CCNF-204ENST00000564333 ANKRD39Q53RE8 183 aa12.53□□□□□ -0.4
CCNF-204ENST00000564333 LINC00477Q96M19 166 aa12.53□□□□□ -0.4
CCNF-204ENST00000564333 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
CCNF-204ENST00000564333 SMPXQ9UHP9 88 aa12.53□□□□□ -0.4
CCNF-204ENST00000564333 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.4
CCNF-204ENST00000564333 TMEM89A2RUT3 159 aa12.52□□□□□ -0.4
CCNF-204ENST00000564333 C10orf99Q6UWK7 81 aa12.52□□□□□ -0.4
CCNF-204ENST00000564333 C9orf118A6NHY6 69 aa12.52□□□□□ -0.41
CCNF-204ENST00000564333 K7EMT4 169 aa12.52□□□□□ -0.41
CCNF-204ENST00000564333 EDN2P20800 178 aa12.52□□□□□ -0.41
CCNF-204ENST00000564333 FCER1GP30273 86 aa12.52□□□□□ -0.41
CCNF-204ENST00000564333 Q6ZQT7 251 aa12.52□□□□□ -0.41
CCNF-204ENST00000564333 LRRC75A-AS1Q8N1F1 130 aa12.52□□□□□ -0.41
CCNF-204ENST00000564333 CSMD2Q7Z408 3487 aa12.52□□□□□ -0.41
CCNF-204ENST00000564333 K7ERU9 68 aa12.51□□□□□ -0.41
CCNF-204ENST00000564333 DEFB1P60022 68 aa12.51□□□□□ -0.41
CCNF-204ENST00000564333 OCIAD2Q56VL3 154 aa12.51□□□□□ -0.41
CCNF-204ENST00000564333 PRSS57Q6UWY2 283 aa12.51□□□□□ -0.41
CCNF-204ENST00000564333 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
CCNF-204ENST00000564333 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
CCNF-204ENST00000564333 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
CCNF-204ENST00000564333 J3KRW8 73 aa12.5□□□□□ -0.41
CCNF-204ENST00000564333 Q6YL49 198 aa12.5□□□□□ -0.41
CCNF-204ENST00000564333 SELENOKQ9Y6D0 94 aa12.5□□□□□ -0.41
CCNF-204ENST00000564333 ATP5LO75964 103 aa12.5□□□□□ -0.41
CCNF-204ENST00000564333 UFC1Q9Y3C8 167 aa12.5□□□□□ -0.41
CCNF-204ENST00000564333 TRAV8-6A0A0B4J262 113 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 GAGE12BA1L429 117 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 SNAI2O43623 268 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 HIGD1BQ9P298 99 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
CCNF-204ENST00000564333 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 F6UB75 175 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 H3BVH4 76 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 HLA-DRB4P13762 266 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 HLA-DRB4X5D2U9 266 aa12.49□□□□□ -0.41
CCNF-204ENST00000564333 TNFRSF6BO95407 300 aa12.48□□□□□ -0.41
CCNF-204ENST00000564333 SRD5A1P18405 259 aa12.48□□□□□ -0.41
CCNF-204ENST00000564333 ADAMTSL5Q6ZMM2 481 aa12.48□□□□□ -0.41
CCNF-204ENST00000564333 Q8N8P6 123 aa12.48□□□□□ -0.41
CCNF-204ENST00000564333 Q96MF0 132 aa12.48□□□□□ -0.41
CCNF-204ENST00000564333 DOPEY2Q9Y3R5 2298 aa12.48□□□□□ -0.41
CCNF-204ENST00000564333 HOXA3O43365 443 aaPredicted RBP12.47□□□□□ -0.41
CCNF-204ENST00000564333 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
CCNF-204ENST00000564333 SAMD13Q5VXD3 122 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms