RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 C8orf49Q96NF6 230 aa12.96□□□□□ -0.33
PKD1-227ENST00000564313 GCGP01275 180 aa12.95□□□□□ -0.34
PKD1-227ENST00000564313 TAGLN2P37802 199 aaKnown RBP12.95□□□□□ -0.34
PKD1-227ENST00000564313 TMEM183BQ1AE95 376 aa12.95□□□□□ -0.34
PKD1-227ENST00000564313 NDUFAF3Q9BU61 184 aa12.95□□□□□ -0.34
PKD1-227ENST00000564313 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
PKD1-227ENST00000564313 GNG13Q9P2W3 67 aa12.95□□□□□ -0.34
PKD1-227ENST00000564313 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
PKD1-227ENST00000564313 TP53TG3Q9ULZ0 132 aa12.95□□□□□ -0.34
PKD1-227ENST00000564313 HTN3P15516 51 aa12.94□□□□□ -0.34
PKD1-227ENST00000564313 BLOC1S1P78537 153 aa12.94□□□□□ -0.34
PKD1-227ENST00000564313 LGALS9BQ3B8N2 356 aa12.94□□□□□ -0.34
PKD1-227ENST00000564313 ALKAL2Q6UX46 152 aa12.94□□□□□ -0.34
PKD1-227ENST00000564313 C18orf15Q96N68 181 aa12.94□□□□□ -0.34
PKD1-227ENST00000564313 SPXQ9BT56 116 aa12.94□□□□□ -0.34
PKD1-227ENST00000564313 CCL20P78556 96 aa12.93□□□□□ -0.34
PKD1-227ENST00000564313 COX8CQ7Z4L0 72 aa12.93□□□□□ -0.34
PKD1-227ENST00000564313 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
PKD1-227ENST00000564313 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
PKD1-227ENST00000564313 HECTD4Q9Y4D8 3996 aa12.93□□□□□ -0.34
PKD1-227ENST00000564313 GAGE12BA1L429 117 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 SPINK4O60575 86 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 GAGE7O76087 117 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 LTAP01374 205 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 LINC00476Q8WZB0 136 aa12.92□□□□□ -0.34
PKD1-227ENST00000564313 TRGV1A0A0A0MS02 117 aa12.91□□□□□ -0.34
PKD1-227ENST00000564313 SCO2A0A1W2PP80 73 aa12.91□□□□□ -0.34
PKD1-227ENST00000564313 FABP5P3A8MUU1 101 aa12.91□□□□□ -0.34
PKD1-227ENST00000564313 ZNF80P51504 273 aaPredicted RBP12.91□□□□□ -0.34
PKD1-227ENST00000564313 LGALS9CQ6DKI2 356 aa12.91□□□□□ -0.34
PKD1-227ENST00000564313 Q6ZTI0 123 aa12.91□□□□□ -0.34
PKD1-227ENST00000564313 DNAH10Q8IVF4 4471 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 TRGV2A0A075B6R0 118 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 F5H768 121 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 PDE6DO43924 150 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 TYMSP04818 313 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 BCL2P10415 239 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 MEF2BQ02080 365 aaPredicted RBP12.9□□□□□ -0.34
PKD1-227ENST00000564313 C15orf53Q8NAA6 179 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 C11orf52Q96A22 123 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 MDFICQ9P1T7 246 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
PKD1-227ENST00000564313 IGHV3-16A0A0C4DH30 117 aa12.89□□□□□ -0.35
PKD1-227ENST00000564313 FAM162BQ5T6X4 162 aa12.89□□□□□ -0.35
PKD1-227ENST00000564313 VAX2Q9UIW0 290 aa12.89□□□□□ -0.35
PKD1-227ENST00000564313 KMT2AQ03164 3969 aa12.88□□□□□ -0.35
PKD1-227ENST00000564313 GNRH2O43555 120 aa12.88□□□□□ -0.35
PKD1-227ENST00000564313 LY6G6CO95867 125 aa12.88□□□□□ -0.35
PKD1-227ENST00000564313 TMEM88Q6PEY1 159 aa12.88□□□□□ -0.35
PKD1-227ENST00000564313 ZC2HC1AQ96GY0 325 aa12.88□□□□□ -0.35
PKD1-227ENST00000564313 KIAA1109Q2LD37 5005 aa12.88□□□□□ -0.35
PKD1-227ENST00000564313 BAGE2Q86Y30 109 aa12.87□□□□□ -0.35
PKD1-227ENST00000564313 LYPD6BQ8NI32 183 aa12.87□□□□□ -0.35
PKD1-227ENST00000564313 RASL10AQ92737 203 aa12.87□□□□□ -0.35
PKD1-227ENST00000564313 M0R2P5 195 aa12.86□□□□□ -0.35
PKD1-227ENST00000564313 P0DMU3 169 aa12.86□□□□□ -0.35
PKD1-227ENST00000564313 FAM231AP0DMU4 169 aa12.86□□□□□ -0.35
PKD1-227ENST00000564313 FAM231CP0DMU5 169 aa12.86□□□□□ -0.35
PKD1-227ENST00000564313 RPL35P42766 123 aaKnown RBP12.86□□□□□ -0.35
PKD1-227ENST00000564313 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
PKD1-227ENST00000564313 MRPL16Q9NX20 251 aaKnown RBP12.86□□□□□ -0.35
PKD1-227ENST00000564313 C11orf21Q9P2W6 132 aa12.86□□□□□ -0.35
PKD1-227ENST00000564313 SMIM12Q96EX1 92 aa12.85□□□□□ -0.35
PKD1-227ENST00000564313 B4DEV8 164 aa12.84□□□□□ -0.35
PKD1-227ENST00000564313 H3BNG1 76 aa12.84□□□□□ -0.35
PKD1-227ENST00000564313 SH2D1AO60880 128 aa12.84□□□□□ -0.35
PKD1-227ENST00000564313 ORM1P02763 201 aa12.84□□□□□ -0.35
PKD1-227ENST00000564313 OR5I1Q13606 314 aa12.84□□□□□ -0.35
PKD1-227ENST00000564313 MLST8Q9BVC4 326 aa12.84□□□□□ -0.35
PKD1-227ENST00000564313 IGKV3D-20A0A0C4DH25 116 aa12.83□□□□□ -0.36
PKD1-227ENST00000564313 S100A4P26447 101 aaKnown RBP12.83□□□□□ -0.36
PKD1-227ENST00000564313 ASIPP42127 132 aa12.83□□□□□ -0.36
PKD1-227ENST00000564313 CRIP1P50238 77 aa12.83□□□□□ -0.36
PKD1-227ENST00000564313 SLAQ13239 276 aa12.83□□□□□ -0.36
PKD1-227ENST00000564313 LINC01559Q495D7 138 aa12.83□□□□□ -0.36
PKD1-227ENST00000564313 PTH2Q96A98 100 aa12.83□□□□□ -0.36
PKD1-227ENST00000564313 C9orf85Q96MD7 179 aa12.83□□□□□ -0.36
PKD1-227ENST00000564313 HOXA5P20719 270 aa12.82□□□□□ -0.36
PKD1-227ENST00000564313 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
PKD1-227ENST00000564313 NHLRC2Q8NBF2 726 aa12.82□□□□□ -0.36
PKD1-227ENST00000564313 DERL1Q9BUN8 251 aa12.82□□□□□ -0.36
PKD1-227ENST00000564313 MED9Q9NWA0 146 aa12.82□□□□□ -0.36
PKD1-227ENST00000564313 TRAV26-1A0A087WT03 109 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 TRAV4A0A0B4J268 109 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 PIK3CD-AS1Q5SR53 167 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 IL36BQ9NZH7 164 aa12.81□□□□□ -0.36
PKD1-227ENST00000564313 MUC4Q99102 2169 aa12.8□□□□□ -0.36
PKD1-227ENST00000564313 TMEM250H0YL14 139 aa12.8□□□□□ -0.36
PKD1-227ENST00000564313 CIDEAO60543 219 aa12.8□□□□□ -0.36
PKD1-227ENST00000564313 NDUFS6O75380 124 aaKnown RBP12.8□□□□□ -0.36
PKD1-227ENST00000564313 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
PKD1-227ENST00000564313 GNG4P50150 75 aa12.8□□□□□ -0.36
PKD1-227ENST00000564313 ZNF876PQ49A33 203 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms