RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 OR4C5Q8NGB2 326 aa16.16■□□□□ 0.18
NME3-206ENST00000564252 TXNDC17Q9BRA2 123 aa16.16■□□□□ 0.18
NME3-206ENST00000564252 MSRB1Q9NZV6 116 aa16.16■□□□□ 0.18
NME3-206ENST00000564252 TRAV8-1A0A0A6YYK1 113 aa16.15■□□□□ 0.18
NME3-206ENST00000564252 TRAV21A0A0B4J279 112 aa16.15■□□□□ 0.18
NME3-206ENST00000564252 F6UZH7 168 aa16.15■□□□□ 0.18
NME3-206ENST00000564252 TYMSP04818 313 aa16.15■□□□□ 0.18
NME3-206ENST00000564252 EVI2AP22794 236 aa16.15■□□□□ 0.18
NME3-206ENST00000564252 RAB2AP61019 212 aa16.15■□□□□ 0.18
NME3-206ENST00000564252 PTTG2Q9NZH5 202 aa16.15■□□□□ 0.18
NME3-206ENST00000564252 LOC100131303A0A0U1RQF7 123 aa16.14■□□□□ 0.17
NME3-206ENST00000564252 A0A1W2PPV4 95 aa16.14■□□□□ 0.17
NME3-206ENST00000564252 TREM1Q9NP99 234 aa16.14■□□□□ 0.17
NME3-206ENST00000564252 A6NHS1 94 aa16.13■□□□□ 0.17
NME3-206ENST00000564252 XGP55808 180 aa16.13■□□□□ 0.17
NME3-206ENST00000564252 GNG5P63218 68 aa16.13■□□□□ 0.17
NME3-206ENST00000564252 HMGB3O15347 200 aaKnown RBP16.12■□□□□ 0.17
NME3-206ENST00000564252 SDF2L1Q9HCN8 221 aa16.12■□□□□ 0.17
NME3-206ENST00000564252 EPM2AB3EWF7 344 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 CRYGDP07320 174 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 GATA1P15976 413 aaPredicted RBP16.11■□□□□ 0.17
NME3-206ENST00000564252 DEFA1P59665 94 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 DEFA3P59666 94 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 KRTAP10-1P60331 282 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 OR10G9Q8NGN4 311 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 OR10G7Q8NGN6 311 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 KCNS1Q96KK3 526 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 HERC1Q15751 4861 aa16.11■□□□□ 0.17
NME3-206ENST00000564252 ASB13Q8WXK3 278 aa16.1■□□□□ 0.17
NME3-206ENST00000564252 ARL14EPLP0DKL9 152 aa16.09■□□□□ 0.17
NME3-206ENST00000564252 TIRAPP58753 221 aa16.09■□□□□ 0.17
NME3-206ENST00000564252 SH2D6Q7Z4S9 175 aa16.09■□□□□ 0.17
NME3-206ENST00000564252 C10orf126Q8N4M7 172 aa16.09■□□□□ 0.17
NME3-206ENST00000564252 SGK494Q96LW2 274 aa16.09■□□□□ 0.17
NME3-206ENST00000564252 NHLRC2Q8NBF2 726 aa16.08■□□□□ 0.16
NME3-206ENST00000564252 STAG3L2P0CL84 134 aa16.07■□□□□ 0.16
NME3-206ENST00000564252 STAG3L3P0CL85 134 aa16.07■□□□□ 0.16
NME3-206ENST00000564252 CDC34P49427 236 aaPredicted RBP16.07■□□□□ 0.16
NME3-206ENST00000564252 C11orf21Q9P2W6 132 aa16.07■□□□□ 0.16
NME3-206ENST00000564252 SERTM2A0A1B0GWG4 89 aa16.06■□□□□ 0.16
NME3-206ENST00000564252 FBLL1A6NHQ2 334 aaKnown RBP16.06■□□□□ 0.16
NME3-206ENST00000564252 ZNF80P51504 273 aaPredicted RBP16.06■□□□□ 0.16
NME3-206ENST00000564252 OR2G3Q8NGZ4 309 aa16.06■□□□□ 0.16
NME3-206ENST00000564252 SUN5Q8TC36 379 aa16.06■□□□□ 0.16
NME3-206ENST00000564252 NDFIP1Q9BT67 221 aa16.06■□□□□ 0.16
NME3-206ENST00000564252 IGHV3-38A0A0C4DH36 116 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 TCRAP04437 139 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 PPT1P50897 306 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 ZNF876PQ49A33 203 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 CFAP126Q5VTH2 177 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 DPPA3Q6W0C5 159 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 SLC25A29Q8N8R3 303 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 C5orf17Q8NAS9 161 aa16.05■□□□□ 0.16
NME3-206ENST00000564252 DNAH8Q96JB1 4490 aa16.04■□□□□ 0.16
NME3-206ENST00000564252 RS1O15537 224 aa16.04■□□□□ 0.16
NME3-206ENST00000564252 LINC01556Q5JQF7 62 aa16.04■□□□□ 0.16
NME3-206ENST00000564252 HSD17B11Q8NBQ5 300 aa16.04■□□□□ 0.16
NME3-206ENST00000564252 GCHFRP30047 84 aa16.03■□□□□ 0.16
NME3-206ENST00000564252 RAB24Q969Q5 203 aa16.03■□□□□ 0.16
NME3-206ENST00000564252 C9orf85Q96MD7 179 aa16.03■□□□□ 0.16
NME3-206ENST00000564252 ALG5Q9Y673 324 aa16.03■□□□□ 0.16
NME3-206ENST00000564252 LRCOL1A6NCL2 159 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 TAAR5O14804 337 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 CIDEAO60543 219 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 GCGP01275 180 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 IGLV2-11P01706 119 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 PFN1P07737 140 aaKnown RBP16.02■□□□□ 0.16
NME3-206ENST00000564252 GCSHP23434 173 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 TMEM75Q8N9X5 138 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 PSMG3Q9BT73 122 aaPredicted RBP16.02■□□□□ 0.16
NME3-206ENST00000564252 PSG8Q9UQ74 426 aa16.02■□□□□ 0.16
NME3-206ENST00000564252 TRBV6-4A0A1B0GX49 114 aa16.01■□□□□ 0.15
NME3-206ENST00000564252 IBA57-AS1B1ANH7 110 aa16.01■□□□□ 0.15
NME3-206ENST00000564252 RHOHQ15669 191 aa16.01■□□□□ 0.15
NME3-206ENST00000564252 Q5VSD8 79 aa16.01■□□□□ 0.15
NME3-206ENST00000564252 PRADC1Q9BSG0 188 aa16.01■□□□□ 0.15
NME3-206ENST00000564252 MYCBP2O75592 4640 aa16.01■□□□□ 0.15
NME3-206ENST00000564252 IGHV3-73A0A0B4J1V6 119 aa16■□□□□ 0.15
NME3-206ENST00000564252 GGTLC3B5MD39 225 aa16■□□□□ 0.15
NME3-206ENST00000564252 K7EQM0 130 aa16■□□□□ 0.15
NME3-206ENST00000564252 INAFM2P0DMQ5 153 aa16■□□□□ 0.15
NME3-206ENST00000564252 ATP6V0CP27449 155 aa16■□□□□ 0.15
NME3-206ENST00000564252 AQP10Q96PS8 301 aa16■□□□□ 0.15
NME3-206ENST00000564252 TRAV8-6A0A0B4J262 113 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 PGPEP1LA6NFU8 196 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 PSCAO43653 123 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 RNASE3P12724 160 aaKnown RBP15.99■□□□□ 0.15
NME3-206ENST00000564252 SUMO1P63165 101 aaKnown RBP15.99■□□□□ 0.15
NME3-206ENST00000564252 FLI1Q01543 452 aaPredicted RBP15.99■□□□□ 0.15
NME3-206ENST00000564252 OR10J3Q5JRS4 329 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 ZNF506Q5JVG8 444 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 FRZBQ92765 325 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 PTH2Q96A98 100 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 EPDR1Q9UM22 224 aa15.99■□□□□ 0.15
NME3-206ENST00000564252 SRRM2Q9UQ35 2752 aaKnown RBP15.98■□□□□ 0.15
NME3-206ENST00000564252 SERF2P84101 59 aa15.98■□□□□ 0.15
NME3-206ENST00000564252 SMUG1Q53HV7 270 aa15.98■□□□□ 0.15
NME3-206ENST00000564252 PRNTQ86SH4 94 aa15.98■□□□□ 0.15
NME3-206ENST00000564252 TMEM167BQ9NRX6 74 aa15.98■□□□□ 0.15
NME3-206ENST00000564252 BOLA1Q9Y3E2 137 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms