RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ZNF471Q9BX82 626 aaPredicted RBP21.35■■□□□ 1.01
CMTM4-204ENST00000563952 TRAV34A0A0B4J273 112 aa21.34■■□□□ 1.01
CMTM4-204ENST00000563952 FAM74A7A6NL05 159 aa21.34■■□□□ 1.01
CMTM4-204ENST00000563952 RTL8CO15255 209 aa21.34■■□□□ 1.01
CMTM4-204ENST00000563952 BCL2L11O43521 198 aa21.34■■□□□ 1.01
CMTM4-204ENST00000563952 FHITP49789 147 aa21.34■■□□□ 1.01
CMTM4-204ENST00000563952 ZFP69Q49AA0 526 aa21.34■■□□□ 1.01
CMTM4-204ENST00000563952 KCNS1Q96KK3 526 aa21.34■■□□□ 1.01
CMTM4-204ENST00000563952 FBLL1A6NHQ2 334 aaKnown RBP21.33■■□□□ 1.01
CMTM4-204ENST00000563952 PAX4O43316 350 aa21.33■■□□□ 1.01
CMTM4-204ENST00000563952 SMUG1Q53HV7 270 aa21.33■■□□□ 1.01
CMTM4-204ENST00000563952 PEX7O00628 323 aa21.32■■□□□ 1
CMTM4-204ENST00000563952 ESRGQ1W209 222 aa21.32■■□□□ 1
CMTM4-204ENST00000563952 STOML3Q8TAV4 291 aa21.32■■□□□ 1
CMTM4-204ENST00000563952 RASL10AQ92737 203 aa21.32■■□□□ 1
CMTM4-204ENST00000563952 NKX6-2Q9C056 277 aaPredicted RBP21.32■■□□□ 1
CMTM4-204ENST00000563952 A0A096LPF7 62 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 SFTA3P0C7M3 94 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 SEC11BP0C7V7 166 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 PPT1P50897 306 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 FHL2Q14192 279 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 SAPCD1Q5SSQ6 148 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 C11orf21Q9P2W6 132 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 PRO0255Q9UI72 69 aa21.31■■□□□ 1
CMTM4-204ENST00000563952 TRGV4A0A0C4DH28 118 aa21.3■■□□□ 1
CMTM4-204ENST00000563952 PFDN1O60925 122 aa21.3■■□□□ 1
CMTM4-204ENST00000563952 PFN1P07737 140 aaKnown RBP21.3■■□□□ 1
CMTM4-204ENST00000563952 FAM213BQ8TBF2 198 aa21.3■■□□□ 1
CMTM4-204ENST00000563952 HHLA3Q9XRX5 114 aa21.3■■□□□ 1
CMTM4-204ENST00000563952 NBDYA0A0U1RRE5 68 aa21.29■■□□□ 1
CMTM4-204ENST00000563952 PRSS29PA6NIE9 313 aa21.29■■□□□ 1
CMTM4-204ENST00000563952 M0R2P5 195 aa21.29■■□□□ 1
CMTM4-204ENST00000563952 ZNF479Q96JC4 524 aa21.29■■□□□ 1
CMTM4-204ENST00000563952 ARL2-SNX15V9GYD0 113 aa21.29■■□□□ 1
CMTM4-204ENST00000563952 CRYBA4P53673 196 aa21.28■■□□□ 1
CMTM4-204ENST00000563952 SLAQ13239 276 aa21.28■■□□□ 1
CMTM4-204ENST00000563952 SOHLH1Q5JUK2 328 aa21.28■■□□□ 1
CMTM4-204ENST00000563952 C1orf134Q5TEV5 83 aa21.28■■□□□ 1
CMTM4-204ENST00000563952 TMUB2Q71RG4 321 aa21.28■■□□□ 1
CMTM4-204ENST00000563952 HIST1H2BAQ96A08 127 aa21.28■■□□□ 1
CMTM4-204ENST00000563952 ICOSQ9Y6W8 199 aa21.28■■□□□ 1
CMTM4-204ENST00000563952 UMAD1C9J7I0 102 aa21.27■■□□□ 1
CMTM4-204ENST00000563952 CST9LP1Q5W188 147 aa21.27■■□□□ 1
CMTM4-204ENST00000563952 Q9H8V8 135 aa21.27■■□□□ 1
CMTM4-204ENST00000563952 EIF5AP63241 154 aaKnown RBP21.26■□□□□ 0.99
CMTM4-204ENST00000563952 Q86TA4 180 aa21.26■□□□□ 0.99
CMTM4-204ENST00000563952 SFT2D1Q8WV19 159 aa21.26■□□□□ 0.99
CMTM4-204ENST00000563952 A0A1B0GV50 99 aa21.25■□□□□ 0.99
CMTM4-204ENST00000563952 MRPS16Q9Y3D3 137 aaKnown RBP21.25■□□□□ 0.99
CMTM4-204ENST00000563952 TRAV4A0A0B4J268 109 aa21.24■□□□□ 0.99
CMTM4-204ENST00000563952 OR4C5Q8NGB2 326 aa21.24■□□□□ 0.99
CMTM4-204ENST00000563952 DNAH2Q9P225 4427 aa21.23■□□□□ 0.99
CMTM4-204ENST00000563952 C9JCJ5 164 aa21.22■□□□□ 0.99
CMTM4-204ENST00000563952 TPT1P13693 172 aaKnown RBP21.22■□□□□ 0.99
CMTM4-204ENST00000563952 MBD3L1Q8WWY6 194 aa21.22■□□□□ 0.99
CMTM4-204ENST00000563952 UPK3BQ9BT76 320 aa21.22■□□□□ 0.99
CMTM4-204ENST00000563952 PAGE4O60829 102 aa21.21■□□□□ 0.99
CMTM4-204ENST00000563952 UBE2G1P62253 170 aa21.21■□□□□ 0.99
CMTM4-204ENST00000563952 DPPA3Q6W0C5 159 aa21.21■□□□□ 0.99
CMTM4-204ENST00000563952 FMC1Q96HJ9 113 aa21.2■□□□□ 0.98
CMTM4-204ENST00000563952 HECTD4Q9Y4D8 3996 aa21.19■□□□□ 0.98
CMTM4-204ENST00000563952 A0A1B0GVY2 172 aa21.19■□□□□ 0.98
CMTM4-204ENST00000563952 FABP5P3A8MUU1 101 aa21.19■□□□□ 0.98
CMTM4-204ENST00000563952 MRPL23Q16540 153 aaKnown RBP21.19■□□□□ 0.98
CMTM4-204ENST00000563952 ZNF876PQ49A33 203 aa21.19■□□□□ 0.98
CMTM4-204ENST00000563952 TCEAL7Q9BRU2 100 aa21.19■□□□□ 0.98
CMTM4-204ENST00000563952 TCTE3Q8IZS6 198 aa21.18■□□□□ 0.98
CMTM4-204ENST00000563952 C6orf223Q8N319 242 aa21.18■□□□□ 0.98
CMTM4-204ENST00000563952 PCNPQ8WW12 178 aaKnown RBP21.18■□□□□ 0.98
CMTM4-204ENST00000563952 C9orf85Q96MD7 179 aa21.18■□□□□ 0.98
CMTM4-204ENST00000563952 DNAH17Q9UFH2 4485 aa21.18■□□□□ 0.98
CMTM4-204ENST00000563952 H2AFB1P0C5Y9 115 aa21.17■□□□□ 0.98
CMTM4-204ENST00000563952 GYPEP15421 78 aa21.17■□□□□ 0.98
CMTM4-204ENST00000563952 AKR1C3P42330 323 aa21.17■□□□□ 0.98
CMTM4-204ENST00000563952 Q6ZNX1 250 aa21.17■□□□□ 0.98
CMTM4-204ENST00000563952 ZC2HC1AQ96GY0 325 aa21.17■□□□□ 0.98
CMTM4-204ENST00000563952 ZFP30Q9Y2G7 519 aa21.17■□□□□ 0.98
CMTM4-204ENST00000563952 IGKV3D-20A0A0C4DH25 116 aa21.16■□□□□ 0.98
CMTM4-204ENST00000563952 TTC32Q5I0X7 151 aa21.16■□□□□ 0.98
CMTM4-204ENST00000563952 KRTAP17-1Q9BYP8 105 aa21.16■□□□□ 0.98
CMTM4-204ENST00000563952 K7EQD1 137 aa21.15■□□□□ 0.98
CMTM4-204ENST00000563952 ORM1P02763 201 aa21.15■□□□□ 0.98
CMTM4-204ENST00000563952 RNASE3P12724 160 aaKnown RBP21.15■□□□□ 0.98
CMTM4-204ENST00000563952 SRIP30626 198 aa21.15■□□□□ 0.98
CMTM4-204ENST00000563952 LGALSLQ3ZCW2 172 aaPredicted RBP21.15■□□□□ 0.98
CMTM4-204ENST00000563952 NEGR1Q7Z3B1 354 aa21.15■□□□□ 0.98
CMTM4-204ENST00000563952 FAT2Q9NYQ8 4349 aa21.15■□□□□ 0.98
CMTM4-204ENST00000563952 S100A4P26447 101 aaKnown RBP21.14■□□□□ 0.97
CMTM4-204ENST00000563952 KRTAP1-5Q9BYS1 174 aa21.14■□□□□ 0.97
CMTM4-204ENST00000563952 PGPEP1LA6NFU8 196 aa21.13■□□□□ 0.97
CMTM4-204ENST00000563952 CRIP1P50238 77 aa21.13■□□□□ 0.97
CMTM4-204ENST00000563952 ZNF506Q5JVG8 444 aa21.13■□□□□ 0.97
CMTM4-204ENST00000563952 LYPD5Q6UWN5 251 aa21.13■□□□□ 0.97
CMTM4-204ENST00000563952 B4DEV8 164 aa21.12■□□□□ 0.97
CMTM4-204ENST00000563952 SH2D1AO60880 128 aa21.12■□□□□ 0.97
CMTM4-204ENST00000563952 NXPH4O95158 308 aa21.12■□□□□ 0.97
CMTM4-204ENST00000563952 ASIPP42127 132 aa21.12■□□□□ 0.97
CMTM4-204ENST00000563952 CFAP126Q5VTH2 177 aa21.12■□□□□ 0.97
CMTM4-204ENST00000563952 hCG_2014768A0A024R1R8 64 aa21.11■□□□□ 0.97
CMTM4-204ENST00000563952 TRBV6-1A0A0K0K1D8 114 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms