RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 TEX29Q8N6K0 151 aa9.15□□□□□ -0.94
ABCA3-203ENST00000563623 ZNF418Q8TF45 676 aaPredicted RBP9.15□□□□□ -0.94
ABCA3-203ENST00000563623 F8W735 103 aaPredicted RBP9.14□□□□□ -0.95
ABCA3-203ENST00000563623 TTC9CQ8N5M4 171 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 TRBV20-1A0A075B6N2 111 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 LAGE3Q14657 143 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 NPBQ8NG41 125 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 METTL26Q96S19 204 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 ATP5J2P56134 94 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 GAGE13Q4V321 117 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 GLMPQ8WWB7 406 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 ZFYVE26Q68DK2 2539 aa9.14□□□□□ -0.95
ABCA3-203ENST00000563623 SPENQ96T58 3664 aaKnown RBP9.14□□□□□ -0.95
ABCA3-203ENST00000563623 OR11H12B2RN74 326 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 INSL3P51460 131 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 TTC32Q5I0X7 151 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 Q8N8P6 123 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 OR11H1Q8NG94 326 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 OR11H6Q8NGC7 330 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 OR11H2Q8NH07 326 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 SCGB3A1Q96QR1 104 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 ATP6V0E1O15342 81 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 RPL32P62910 135 aaKnown RBP9.13□□□□□ -0.95
ABCA3-203ENST00000563623 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 C1QTNF4Q9BXJ3 329 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 IGHV7-81A0A0B4J1V7 117 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 IGKV3D-20A0A0C4DH25 116 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 ZNF502Q8TBZ5 544 aa9.13□□□□□ -0.95
ABCA3-203ENST00000563623 DEFB1P60022 68 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 ZFAND6Q6FIF0 208 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 CEND1Q8N111 149 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 MAPKAPK5-AS1Q8N8E1 139 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 C11orf21Q9P2W6 132 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 TMEM219Q86XT9 240 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 VKORC1Q9BQB6 163 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 IGHG4P01861 327 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 SRSF9Q13242 221 aaKnown RBP eCLIP9.12□□□□□ -0.95
ABCA3-203ENST00000563623 FAM208BQ5VWN6 2430 aa9.12□□□□□ -0.95
ABCA3-203ENST00000563623 SRSF1Q07955 248 aaKnown RBP eCLIP9.11□□□□□ -0.95
ABCA3-203ENST00000563623 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 SLC50A1Q9BRV3 221 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 UBTD1Q9HAC8 227 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 LOC107984156A0A0G2JMH3 177 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 ARL17AQ8IVW1 177 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 C14orf178Q8N769 122 aaPredicted RBP9.11□□□□□ -0.95
ABCA3-203ENST00000563623 TMEM190Q8WZ59 177 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 LINC01548A6NM66 108 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 BUB3O43684 328 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 EMP1P54849 157 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 PHLDA3Q9Y5J5 127 aa9.11□□□□□ -0.95
ABCA3-203ENST00000563623 ZNF292O60281 2723 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 M0R1W7 72 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 IGF2-ASQ6U949 168 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 MYO18BQ8IUG5 2567 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 ACACBO00763 2458 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 NOTCH2Q04721 2471 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 PRSS29PA6NIE9 313 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 LY6G5BQ8NDX9 201 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 SORL1Q92673 2214 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 EEF1AKMT3Q96AZ1 226 aa9.1□□□□□ -0.95
ABCA3-203ENST00000563623 SPANXB1Q9NS25 103 aaPredicted RBP9.1□□□□□ -0.95
ABCA3-203ENST00000563623 DOPEY2Q9Y3R5 2298 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 IGLL5B9A064 214 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 IGF1P05019 195 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 C12orf74Q32Q52 190 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 Q8N9W7 124 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 RAXQ9Y2V3 346 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 F5H697 171 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 TGFAP01135 160 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 PAX8Q06710 450 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 ERG28Q9UKR5 140 aa9.09□□□□□ -0.95
ABCA3-203ENST00000563623 IGHV3-11P01762 117 aa9.09□□□□□ -0.96
ABCA3-203ENST00000563623 ZFP36P26651 326 aaKnown RBP9.09□□□□□ -0.96
ABCA3-203ENST00000563623 F8W1H4 67 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 RNASE4P34096 147 aaKnown RBP9.08□□□□□ -0.96
ABCA3-203ENST00000563623 CSPG4Q6UVK1 2322 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 CSMD1Q96PZ7 3565 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 A0A087WX48 190 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE12JA6NER3 117 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE7O76087 117 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE12FP0CL80 117 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE12GP0CL81 117 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE12IP0CL82 117 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 SRD5A1P18405 259 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE4Q13068 117 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 RPL39LQ96EH5 51 aaKnown RBP9.08□□□□□ -0.96
ABCA3-203ENST00000563623 HIGD1BQ9P298 99 aa9.08□□□□□ -0.96
ABCA3-203ENST00000563623 TSPAN13O95857 204 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 SAA4P35542 130 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 FAM110DQ8TAY7 271 aaPredicted RBP9.07□□□□□ -0.96
ABCA3-203ENST00000563623 FAM110AQ9BQ89 295 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 ODF3BA8MYP8 253 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 H7C1H1 209 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 CDSNQ15517 529 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms