RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 RNF182Q8N6D2 247 aa9.96□□□□□ -0.82
CCDC187-201ENST00000563590 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
CCDC187-201ENST00000563590 SIGLEC9Q9Y336 463 aa9.96□□□□□ -0.82
CCDC187-201ENST00000563590 FN1P02751 2386 aaKnown RBP9.96□□□□□ -0.82
CCDC187-201ENST00000563590 CLEC3BP05452 202 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 ZFAND6Q6FIF0 208 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 SHANK2-AS3Q9BTD1 123 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 TMEM238LA0A1B0GVL6 79 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 A6NJY4 79 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 IGLV3-9A0A075B6K5 115 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 MBD3L4A6NDZ8 208 aaPredicted RBP9.95□□□□□ -0.82
CCDC187-201ENST00000563590 MBD3L3A6NE82 208 aaPredicted RBP9.95□□□□□ -0.82
CCDC187-201ENST00000563590 MBD3L5A6NJ08 208 aaPredicted RBP9.95□□□□□ -0.82
CCDC187-201ENST00000563590 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
CCDC187-201ENST00000563590 KLHL30-AS1Q8NEE0 82 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 MBD3L2Q8NHZ7 208 aaPredicted RBP9.95□□□□□ -0.82
CCDC187-201ENST00000563590 CTSZQ9UBR2 303 aa9.95□□□□□ -0.82
CCDC187-201ENST00000563590 E7EQL1 145 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 TIMM23O14925 209 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 TMEM30BQ3MIR4 351 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 DTX2Q86UW9 622 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 PRR25Q96S07 402 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 FABP5P3A8MUU1 101 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 FCN3O75636 299 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 SNCGO76070 127 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 XGP55808 180 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 KLRB1Q12918 225 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 LAGE3Q14657 143 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 MRGPRG-AS1Q2M3A8 158 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 WI2-2373I1.2A0A1W2PRP0 233 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 A8MWV9 139 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 TRGV3P03979 118 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 SLC25A16P16260 332 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 TMEM78Q5T7P6 136 aa9.94□□□□□ -0.82
CCDC187-201ENST00000563590 SMIM20Q8N5G0 67 aa9.93□□□□□ -0.82
CCDC187-201ENST00000563590 LY6EQ16553 131 aa9.93□□□□□ -0.82
CCDC187-201ENST00000563590 C1QTNF4Q9BXJ3 329 aa9.93□□□□□ -0.82
CCDC187-201ENST00000563590 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
CCDC187-201ENST00000563590 F5H697 171 aa9.93□□□□□ -0.82
CCDC187-201ENST00000563590 IGHV4-39P01824 125 aa9.93□□□□□ -0.82
CCDC187-201ENST00000563590 SPATA25Q9BR10 227 aa9.93□□□□□ -0.82
CCDC187-201ENST00000563590 TMEM178BH3BS89 294 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 Q6ZUT4 128 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 Q8NA96 180 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 TIMD4Q96H15 378 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 C9JAW5 83 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 ZNF491Q8N8L2 437 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 ZNF462Q96JM2 2506 aa9.92□□□□□ -0.82
CCDC187-201ENST00000563590 MYMXA0A1B0GTQ4 84 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 HTN1P15515 57 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 IL17RELQ6ZVW7 336 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 HOXB4P17483 251 aaPredicted RBP9.91□□□□□ -0.82
CCDC187-201ENST00000563590 TMEM219Q86XT9 240 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 HIGD1BQ9P298 99 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 IGHV1-8P0DP01 117 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 MFAP4P55083 255 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 DLX6P56179 175 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 TEX36Q5VZQ5 186 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 TM2D2Q9BX73 214 aa9.91□□□□□ -0.82
CCDC187-201ENST00000563590 SRSF1Q07955 248 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC187-201ENST00000563590 TCTEX1D4Q5JR98 221 aa9.9□□□□□ -0.82
CCDC187-201ENST00000563590 SMPXQ9UHP9 88 aa9.9□□□□□ -0.82
CCDC187-201ENST00000563590 IGHV1-3A0A0C4DH29 117 aa9.9□□□□□ -0.82
CCDC187-201ENST00000563590 LINC01548A6NM66 108 aa9.9□□□□□ -0.82
CCDC187-201ENST00000563590 GATD1Q8NB37 220 aa9.9□□□□□ -0.82
CCDC187-201ENST00000563590 H3BRN7 92 aa9.9□□□□□ -0.83
CCDC187-201ENST00000563590 PRSS2P07478 247 aa9.9□□□□□ -0.83
CCDC187-201ENST00000563590 TMEM155Q4W5P6 130 aa9.9□□□□□ -0.83
CCDC187-201ENST00000563590 ZNF493Q6ZR52 646 aa9.9□□□□□ -0.83
CCDC187-201ENST00000563590 TMEM14CQ9P0S9 112 aa9.9□□□□□ -0.83
CCDC187-201ENST00000563590 H7C1H1 209 aa9.89□□□□□ -0.83
CCDC187-201ENST00000563590 PPDPFLQ8WWR9 84 aa9.89□□□□□ -0.83
CCDC187-201ENST00000563590 SRD5A1P18405 259 aa9.89□□□□□ -0.83
CCDC187-201ENST00000563590 PLNP26678 52 aa9.89□□□□□ -0.83
CCDC187-201ENST00000563590 NFE4Q86UQ8 179 aa9.89□□□□□ -0.83
CCDC187-201ENST00000563590 C21orf62Q9NYP8 219 aa9.89□□□□□ -0.83
CCDC187-201ENST00000563590 FASNP49327 2511 aaKnown RBP9.89□□□□□ -0.83
CCDC187-201ENST00000563590 PHLDA1Q8WV24 401 aaPredicted RBP9.89□□□□□ -0.83
CCDC187-201ENST00000563590 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 IGHV3-11P01762 117 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 THBDP07204 575 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 LOXP28300 417 aaPredicted RBP9.88□□□□□ -0.83
CCDC187-201ENST00000563590 GAGE5Q13069 117 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 GAGE6Q13070 117 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 ZNF672Q499Z4 452 aaPredicted RBP9.88□□□□□ -0.83
CCDC187-201ENST00000563590 C14orf178Q8N769 122 aaPredicted RBP9.88□□□□□ -0.83
CCDC187-201ENST00000563590 Q8N8P6 123 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 IGKV3-20P01619 116 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 PVRIGQ6DKI7 326 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 DYNAPQ8N1N2 210 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 CFHR4Q92496 578 aa9.88□□□□□ -0.83
CCDC187-201ENST00000563590 A0A087WX48 190 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms