RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ATOH7Q8N100 152 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 C5orf17Q8NAS9 161 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 ATP6V0E2Q8NHE4 81 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 PPDPFLQ8WWR9 84 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 SMIM7Q9BQ49 75 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 LPAR5Q9H1C0 372 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 TPT1P8Q9HAU6 139 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 SAR1AQ9NR31 198 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 MRPL35Q9NZE8 188 aaKnown RBP0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 CALML5Q9NZT1 146 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 BOKQ9UMX3 212 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 KIDINS220Q9ULH0 1771 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 PHRF1Q9P1Y6 1649 aaKnown RBP0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 VIRMAQ69YN4 1812 aaKnown RBP0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 KNTC1P50748 2209 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 TRBV20-1A0A075B6N2 111 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 IGHV1-24A0A0C4DH33 117 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 A0A1W2PPM0 123 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 NUPR2A6NF83 97 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 BBIP1A8MTZ0 92 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 NCR3O14931 201 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 EDF1O60869 148 aaKnown RBP0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 KLF7O75840 302 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 DNAL4O96015 105 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 MT-ND4LP03901 98 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 SPTBP11277 2137 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 EFNA4P52798 201 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 HIST1H1AQ02539 215 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 NEDD8Q15843 81 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 OCIAD2Q56VL3 154 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 GLYATL3Q5SZD4 288 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 IDO2Q6ZQW0 420 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 OR8J3Q8NGG0 315 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 WFDC10AQ9H1F0 79 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 TAS2R8Q9NYW2 309 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 COPZ2Q9P299 210 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 E9PCH4 1651 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 ZDBF2Q9HCK1 2354 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 ANK1P16157 1881 aa0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 ASH1LQ9NR48 2969 aaKnown RBP0.48□□□□□ -2.33
HMGB1P33-201ENST00000563485 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 CTTNBP2Q8WZ74 1663 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 EML5Q05BV3 1969 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 CXorf51AA0A1B0GTR3 108 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 HIGD1CA8MV81 97 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 K7EIL1 84 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 RBP4P02753 201 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 ADCYAP1P18509 176 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 PCBD1P61457 104 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 SNRPD3P62318 126 aaKnown RBP0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 SLC25A26Q70HW3 274 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 Q8N6K4 173 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 LZICQ8WZA0 190 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 TCEAL4Q96EI5 215 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 DMAC1Q96GE9 116 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 VPS25Q9BRG1 176 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 BANF2Q9H503 90 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 COMMD3Q9UBI1 195 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 ADGRB1O14514 1584 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 CITO14578 2027 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 ABCA4P78363 2273 aa0.47□□□□□ -2.33
HMGB1P33-201ENST00000563485 HELZP42694 1942 aaKnown RBP0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 CCDC171Q6TFL3 1326 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 GPR98Q8WXG9 6306 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 LAMA4Q16363 1823 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 TRBV10-1A0A0K0K1A3 114 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 TMEM30CPA0ZSE6 113 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 CCDC179H3BU77 68 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 IGLC6P0CF74 106 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 FXYD4P59646 89 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 NCS1P62166 190 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 XAF1Q6GPH4 301 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 CSAG1Q6PB30 78 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 SCIMPQ6UWF3 145 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 LYPD5Q6UWN5 251 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 PFDN5Q99471 154 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 PLXNA2O75051 1894 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 CDK5RAP2Q96SN8 1893 aa0.46□□□□□ -2.34
HMGB1P33-201ENST00000563485 TMEM2Q9UHN6 1383 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 LOC107984156A0A0G2JMH3 177 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 NBDYA0A0U1RRE5 68 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 J3QR89 54 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 M0R2Z0 102 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 TPST1O60507 370 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 RPL37AP61513 92 aaKnown RBP0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 SARNPP82979 210 aaKnown RBP0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 Q6ZQY7 126 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 ARL17AQ8IVW1 177 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 CTAGE3PQ8IX95 158 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 DYNLRB2Q8TF09 96 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 ATG5Q9H1Y0 275 aa0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 MRPL36Q9P0J6 103 aaKnown RBP0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 LSM2Q9Y333 95 aaKnown RBP0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 ZCCHC6Q5VYS8 1495 aaKnown RBP0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 BLMP54132 1417 aaPredicted RBP0.45□□□□□ -2.34
HMGB1P33-201ENST00000563485 ATG2AQ2TAZ0 1938 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 AKAP11Q9UKA4 1901 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms