RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 A0A1B0GXF2 115 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 F6UB75 175 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BKO60814 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 IGLV1-51P01701 117 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BJP06899 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 TRGC1P0CF51 173 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 PRB4P10163 310 aaPredicted RBP7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HLA-DRB4P13762 266 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BOP23527 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BBP33778 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 CDKN1BP46527 198 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BDP58876 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 DEFB131AP59861 70 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BCP62807 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST2H2BEQ16778 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.22□□□□□ -1.25
UBFD1-202ENST00000563366 TMEM136Q6ZRR5 245 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 FER1L6-AS1Q8NA97 138 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BHQ93079 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BNQ99877 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HIST1H2BMQ99879 126 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 CITED1Q99966 193 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 MAP6D1Q9H9H5 199 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 HLA-DRB4X5D2U9 266 aa7.22□□□□□ -1.25
UBFD1-202ENST00000563366 TMSB15BA0A087X1C1 80 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 A8MTW9 85 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 OR11H12B2RN74 326 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 PHOX2AO14813 284 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 SPINK4O60575 86 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 APCSP02743 223 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 AMBPP02760 352 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 IGLC6P0CF74 106 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 FAM159AQ6UWV7 190 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 MCRIP2Q9BUT9 160 aaKnown RBP7.21□□□□□ -1.26
UBFD1-202ENST00000563366 TPPP3Q9BW30 176 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 CNFNQ9BYD5 112 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 ZNF256Q9Y2P7 627 aaPredicted RBP7.21□□□□□ -1.26
UBFD1-202ENST00000563366 SELENOKQ9Y6D0 94 aa7.21□□□□□ -1.26
UBFD1-202ENST00000563366 C2CD3Q4AC94 2353 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 C7orf71A4D174 169 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 C5orf52A6NGY3 159 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 GZMBP10144 247 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 RNASE4P34096 147 aaKnown RBP7.2□□□□□ -1.26
UBFD1-202ENST00000563366 ASIPP42127 132 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 CAMPP49913 170 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 KRTAP10-3P60369 221 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 NUTF2P61970 127 aaKnown RBP7.2□□□□□ -1.26
UBFD1-202ENST00000563366 CACNG7P62955 275 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 C9orf66Q5T8R8 295 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 GDF5OSQ5U4N7 250 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 LYZL1Q6UWQ5 148 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 GATD1Q8NB37 220 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 SYT8Q8NBV8 401 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 C20orf144Q9BQM9 153 aa7.2□□□□□ -1.26
UBFD1-202ENST00000563366 IGKV3D-20A0A0C4DH25 116 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 H3BMM0 161 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 UBE2CO00762 179 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 OR5AL1P0C617 328 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 ARMS2P0C7Q2 107 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 S100A4P26447 101 aaKnown RBP7.19□□□□□ -1.26
UBFD1-202ENST00000563366 DEFB1P60022 68 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 TDRG1Q3Y452 100 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 COA6Q5JTJ3 125 aaKnown RBP7.19□□□□□ -1.26
UBFD1-202ENST00000563366 DNLZQ5SXM8 178 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 PRR9Q5T870 116 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 HIST2H2BDQ6DRA6 164 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 ZNF493Q6ZR52 646 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 SMIM15Q7Z3B0 74 aa7.19□□□□□ -1.26
UBFD1-202ENST00000563366 LOC105371267A0A1B0GV96 52 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 J3KRW8 73 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 SNAI2O43623 268 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 NDUFA6P56556 154 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 SNRPEP62304 92 aaKnown RBP7.18□□□□□ -1.26
UBFD1-202ENST00000563366 ODF3L2Q3SX64 289 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 OR10J3Q5JRS4 329 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 AMTNQ6UX39 209 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 STHQ8IWL8 128 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 SETD2Q9BYW2 2564 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-202ENST00000563366 WNK1Q9H4A3 2382 aa7.18□□□□□ -1.26
UBFD1-202ENST00000563366 TRGV11A0A075B6L2 103 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 TRAV12-3A0A0B4J271 114 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 GRIFINA4D1Z8 144 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 IGKV3-20P01619 116 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 S100A2P29034 98 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 SLAQ13239 276 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 TWIST1Q15672 202 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 BEAN1Q3B7T3 259 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 GFI1BQ5VTD9 330 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 C11orf21Q9P2W6 132 aa7.17□□□□□ -1.26
UBFD1-202ENST00000563366 IGHV4-4A0A075B6R2 117 aa7.16□□□□□ -1.26
UBFD1-202ENST00000563366 LOC102724200A0A096LPH7 203 aaPredicted RBP7.16□□□□□ -1.26
UBFD1-202ENST00000563366 KNCNA6PVL3 124 aa7.16□□□□□ -1.26
UBFD1-202ENST00000563366 M0R2Z0 102 aa7.16□□□□□ -1.26
UBFD1-202ENST00000563366 ZNF324O75467 553 aaPredicted RBP7.16□□□□□ -1.26
UBFD1-202ENST00000563366 INSP01308 110 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms