RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 HERC2O95714 4834 aa11.15□□□□□ -0.63
USB1-208ENST00000563207 CBY3A6NI87 242 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 TMEM250H0YL14 139 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 AZU1P20160 251 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 RAB14P61106 215 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 IBA57Q5T440 356 aaKnown RBP11.14□□□□□ -0.63
USB1-208ENST00000563207 SMIM12Q96EX1 92 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 KCNS1Q96KK3 526 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
USB1-208ENST00000563207 HECTD4Q9Y4D8 3996 aa11.14□□□□□ -0.63
USB1-208ENST00000563207 TRAV10A0A0B4J240 114 aa11.13□□□□□ -0.63
USB1-208ENST00000563207 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
USB1-208ENST00000563207 RPL35P42766 123 aaKnown RBP11.13□□□□□ -0.63
USB1-208ENST00000563207 EMP1P54849 157 aa11.13□□□□□ -0.63
USB1-208ENST00000563207 BAGE2Q86Y30 109 aa11.13□□□□□ -0.63
USB1-208ENST00000563207 EIF5A2Q9GZV4 153 aaKnown RBP11.13□□□□□ -0.63
USB1-208ENST00000563207 MED9Q9NWA0 146 aa11.13□□□□□ -0.63
USB1-208ENST00000563207 DKK2Q9UBU2 259 aa11.13□□□□□ -0.63
USB1-208ENST00000563207 FAT2Q9NYQ8 4349 aa11.12□□□□□ -0.63
USB1-208ENST00000563207 DEFB131BA0A096LNP1 70 aa11.12□□□□□ -0.63
USB1-208ENST00000563207 PLAC8L1A1L4L8 177 aa11.12□□□□□ -0.63
USB1-208ENST00000563207 SNURFLB1AK76 121 aa11.12□□□□□ -0.63
USB1-208ENST00000563207 PRM2P04554 102 aa11.12□□□□□ -0.63
USB1-208ENST00000563207 MLST8Q9BVC4 326 aa11.12□□□□□ -0.63
USB1-208ENST00000563207 SMDT1Q9H4I9 107 aa11.12□□□□□ -0.63
USB1-208ENST00000563207 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 ZNF80P51504 273 aaPredicted RBP11.11□□□□□ -0.63
USB1-208ENST00000563207 TCTAP57738 103 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
USB1-208ENST00000563207 ZNF674Q2M3X9 581 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 TOR2AQ5JU69 321 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 FAM162BQ5T6X4 162 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 FAM222AQ5U5X8 452 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 Q6ZQT7 251 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 SDF2L1Q9HCN8 221 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 KIAA1109Q2LD37 5005 aa11.11□□□□□ -0.63
USB1-208ENST00000563207 DNAH17Q9UFH2 4485 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 TCL1AP56279 114 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 MUC21Q5SSG8 566 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 C11orf72Q8NBR9 251 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 BIN3Q9NQY0 253 aa11.1□□□□□ -0.63
USB1-208ENST00000563207 GNG4P50150 75 aa11.09□□□□□ -0.63
USB1-208ENST00000563207 SPXQ9BT56 116 aa11.09□□□□□ -0.63
USB1-208ENST00000563207 NAGKQ9UJ70 344 aa11.09□□□□□ -0.63
USB1-208ENST00000563207 C9JCJ5 164 aa11.08□□□□□ -0.64
USB1-208ENST00000563207 CRIP1P50238 77 aa11.08□□□□□ -0.64
USB1-208ENST00000563207 PEA15Q15121 130 aa11.08□□□□□ -0.64
USB1-208ENST00000563207 LGALS9BQ3B8N2 356 aa11.08□□□□□ -0.64
USB1-208ENST00000563207 CENPWQ5EE01 88 aa11.08□□□□□ -0.64
USB1-208ENST00000563207 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
USB1-208ENST00000563207 PCNPQ8WW12 178 aaKnown RBP11.08□□□□□ -0.64
USB1-208ENST00000563207 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
USB1-208ENST00000563207 GSN-AS1Q9NRJ2 163 aa11.08□□□□□ -0.64
USB1-208ENST00000563207 SH2D1AO60880 128 aa11.07□□□□□ -0.64
USB1-208ENST00000563207 DAD1P61803 113 aa11.07□□□□□ -0.64
USB1-208ENST00000563207 IFITM2Q01629 132 aa11.07□□□□□ -0.64
USB1-208ENST00000563207 RAB19A4D1S5 217 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 M0R2N4 97 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 ORM1P02763 201 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 TYMSP04818 313 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 LINC00612Q8N6U2 182 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 PARLQ9H300 379 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
USB1-208ENST00000563207 TRBV20OR9-2A0A075B6H5 130 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 IGHV3-16A0A0C4DH30 117 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 B4DEV8 164 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 GNRH2O43555 120 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 SPINK4O60575 86 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 IGLV2-8P01709 118 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 SRP19P09132 144 aaKnown RBP11.05□□□□□ -0.64
USB1-208ENST00000563207 DNLZQ5SXM8 178 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 C18orf15Q96N68 181 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 LY96Q9Y6Y9 160 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 PKD1P98161 4303 aa11.05□□□□□ -0.64
USB1-208ENST00000563207 KRBOX1C9JBD0 128 aa11.04□□□□□ -0.64
USB1-208ENST00000563207 HTN3P15516 51 aa11.04□□□□□ -0.64
USB1-208ENST00000563207 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
USB1-208ENST00000563207 POM121L12Q8N7R1 296 aa11.04□□□□□ -0.64
USB1-208ENST00000563207 DAZAP1Q96EP5 407 aaKnown RBP11.04□□□□□ -0.64
USB1-208ENST00000563207 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
USB1-208ENST00000563207 M0R2P5 195 aa11.03□□□□□ -0.64
USB1-208ENST00000563207 CXCL1P09341 107 aa11.03□□□□□ -0.64
USB1-208ENST00000563207 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
USB1-208ENST00000563207 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
USB1-208ENST00000563207 MGST1P10620 155 aaKnown RBP11.03□□□□□ -0.64
USB1-208ENST00000563207 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
USB1-208ENST00000563207 SMIM7Q9BQ49 75 aa11.03□□□□□ -0.64
USB1-208ENST00000563207 RTL8CO15255 209 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 ATP5G1P05496 136 aa11.02□□□□□ -0.65
USB1-208ENST00000563207 S100A4P26447 101 aaKnown RBP11.02□□□□□ -0.65
USB1-208ENST00000563207 ASIPP42127 132 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms