RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 RASL10AQ92737 203 aa12.35□□□□□ -0.43
CMTM3-204ENST00000562357 TVP23CQ96ET8 276 aa12.35□□□□□ -0.43
CMTM3-204ENST00000562357 C8orf49Q96NF6 230 aa12.35□□□□□ -0.43
CMTM3-204ENST00000562357 A0A1B0GVY2 172 aa12.34□□□□□ -0.43
CMTM3-204ENST00000562357 CRYBA4P53673 196 aa12.34□□□□□ -0.43
CMTM3-204ENST00000562357 MRPL23Q16540 153 aaKnown RBP12.34□□□□□ -0.43
CMTM3-204ENST00000562357 SMUG1Q53HV7 270 aa12.34□□□□□ -0.43
CMTM3-204ENST00000562357 SAPCD1Q5SSQ6 148 aa12.34□□□□□ -0.43
CMTM3-204ENST00000562357 PRNTQ86SH4 94 aa12.34□□□□□ -0.43
CMTM3-204ENST00000562357 TMEM75Q8N9X5 138 aa12.34□□□□□ -0.43
CMTM3-204ENST00000562357 NKX6-2Q9C056 277 aaPredicted RBP12.34□□□□□ -0.43
CMTM3-204ENST00000562357 MUC4Q99102 2169 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 IGHV3-16A0A0C4DH30 117 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 G3V3Q6 166 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 GNRH2O43555 120 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 GCGP01275 180 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 TYMSP04818 313 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 FHL2Q14192 279 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 OR4C5Q8NGB2 326 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 STOML3Q8TAV4 291 aa12.33□□□□□ -0.44
CMTM3-204ENST00000562357 HECTD4Q9Y4D8 3996 aa12.32□□□□□ -0.44
CMTM3-204ENST00000562357 TRAV4A0A0B4J268 109 aa12.32□□□□□ -0.44
CMTM3-204ENST00000562357 A0A1W2PPQ1 181 aa12.32□□□□□ -0.44
CMTM3-204ENST00000562357 PFN1P07737 140 aaKnown RBP12.32□□□□□ -0.44
CMTM3-204ENST00000562357 SFTA3P0C7M3 94 aa12.32□□□□□ -0.44
CMTM3-204ENST00000562357 UBE2G2P60604 165 aa12.32□□□□□ -0.44
CMTM3-204ENST00000562357 ZNF726P1Q15940 193 aa12.32□□□□□ -0.44
CMTM3-204ENST00000562357 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 MAP1LC3B2A6NCE7 125 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 ORM1P02763 201 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 SRIP30626 198 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
CMTM3-204ENST00000562357 ZNF345Q14585 488 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 NEGR1Q7Z3B1 354 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 ZNF479Q96JC4 524 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 MAP1LC3BQ9GZQ8 125 aa12.31□□□□□ -0.44
CMTM3-204ENST00000562357 C9JCJ5 164 aa12.3□□□□□ -0.44
CMTM3-204ENST00000562357 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
CMTM3-204ENST00000562357 HIST1H2BAQ96A08 127 aa12.3□□□□□ -0.44
CMTM3-204ENST00000562357 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
CMTM3-204ENST00000562357 KANTRA0A1W2PQU2 76 aa12.29□□□□□ -0.44
CMTM3-204ENST00000562357 PEX7O00628 323 aa12.29□□□□□ -0.44
CMTM3-204ENST00000562357 SIVA1O15304 175 aa12.29□□□□□ -0.44
CMTM3-204ENST00000562357 IGLV2-11P01706 119 aa12.29□□□□□ -0.44
CMTM3-204ENST00000562357 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
CMTM3-204ENST00000562357 KCNRGQ8N5I3 272 aa12.29□□□□□ -0.44
CMTM3-204ENST00000562357 FAM74A7A6NL05 159 aa12.28□□□□□ -0.44
CMTM3-204ENST00000562357 NXPH4O95158 308 aa12.28□□□□□ -0.44
CMTM3-204ENST00000562357 GYPEP15421 78 aa12.28□□□□□ -0.44
CMTM3-204ENST00000562357 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
CMTM3-204ENST00000562357 EIF5AP63241 154 aaKnown RBP12.28□□□□□ -0.44
CMTM3-204ENST00000562357 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
CMTM3-204ENST00000562357 TXNDC17Q9BRA2 123 aa12.28□□□□□ -0.44
CMTM3-204ENST00000562357 TRAV34A0A0B4J273 112 aa12.27□□□□□ -0.45
CMTM3-204ENST00000562357 A0A0D9SG52 128 aa12.27□□□□□ -0.45
CMTM3-204ENST00000562357 HMSDA8MTL9 139 aa12.27□□□□□ -0.45
CMTM3-204ENST00000562357 TNP2Q05952 138 aa12.27□□□□□ -0.45
CMTM3-204ENST00000562357 TCEAL7Q9BRU2 100 aa12.27□□□□□ -0.45
CMTM3-204ENST00000562357 ZNF471Q9BX82 626 aaPredicted RBP12.27□□□□□ -0.45
CMTM3-204ENST00000562357 ARL2-SNX15V9GYD0 113 aa12.27□□□□□ -0.45
CMTM3-204ENST00000562357 FAT2Q9NYQ8 4349 aa12.27□□□□□ -0.45
CMTM3-204ENST00000562357 UMAD1C9J7I0 102 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 K7EQD1 137 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 CIDEAO60543 219 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 SEC11BP0C7V7 166 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 MED14OSP0DP75 135 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
CMTM3-204ENST00000562357 UBE2G1P62253 170 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 CST9LP1Q5W188 147 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 LYPD5Q6UWN5 251 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 SH2D6Q7Z4S9 175 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 Q86TA4 180 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 LINC00479Q96M42 142 aa12.26□□□□□ -0.45
CMTM3-204ENST00000562357 DNAH17Q9UFH2 4485 aa12.25□□□□□ -0.45
CMTM3-204ENST00000562357 FABP5P3A8MUU1 101 aa12.25□□□□□ -0.45
CMTM3-204ENST00000562357 PFDN1O60925 122 aa12.25□□□□□ -0.45
CMTM3-204ENST00000562357 KRTAP1-5Q9BYS1 174 aa12.25□□□□□ -0.45
CMTM3-204ENST00000562357 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
CMTM3-204ENST00000562357 TRAV9-2A0A087WT02 112 aa12.24□□□□□ -0.45
CMTM3-204ENST00000562357 BCL2L11O43521 198 aa12.24□□□□□ -0.45
CMTM3-204ENST00000562357 NHLRC2Q8NBF2 726 aa12.24□□□□□ -0.45
CMTM3-204ENST00000562357 FAM213BQ8TBF2 198 aa12.24□□□□□ -0.45
CMTM3-204ENST00000562357 FMC1Q96HJ9 113 aa12.24□□□□□ -0.45
CMTM3-204ENST00000562357 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
CMTM3-204ENST00000562357 ASIPP42127 132 aa12.23□□□□□ -0.45
CMTM3-204ENST00000562357 FHITP49789 147 aa12.23□□□□□ -0.45
CMTM3-204ENST00000562357 SFT2D1Q8WV19 159 aa12.23□□□□□ -0.45
CMTM3-204ENST00000562357 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
CMTM3-204ENST00000562357 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
CMTM3-204ENST00000562357 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
CMTM3-204ENST00000562357 AKR1C3P42330 323 aa12.22□□□□□ -0.45
CMTM3-204ENST00000562357 RHOHQ15669 191 aa12.22□□□□□ -0.45
CMTM3-204ENST00000562357 OR11H4Q8NGC9 324 aa12.22□□□□□ -0.45
CMTM3-204ENST00000562357 PTH2Q96A98 100 aa12.22□□□□□ -0.45
CMTM3-204ENST00000562357 LY96Q9Y6Y9 160 aa12.22□□□□□ -0.45
CMTM3-204ENST00000562357 C16orf90A8MZG2 172 aa12.21□□□□□ -0.45
CMTM3-204ENST00000562357 B4DEV8 164 aa12.21□□□□□ -0.45
CMTM3-204ENST00000562357 RS1O15537 224 aa12.21□□□□□ -0.45
CMTM3-204ENST00000562357 TPT1P13693 172 aaKnown RBP12.21□□□□□ -0.45
CMTM3-204ENST00000562357 LINC00315P59091 139 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms