RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 LRCOL1A6NCL2 159 aa9.79□□□□□ -0.84
SPG7-205ENST00000561945 UBE2L3P68036 154 aaKnown RBP9.79□□□□□ -0.84
SPG7-205ENST00000561945 TMEM183BQ1AE95 376 aa9.79□□□□□ -0.84
SPG7-205ENST00000561945 KHDC3LQ587J8 217 aa9.79□□□□□ -0.84
SPG7-205ENST00000561945 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
SPG7-205ENST00000561945 TMEM183AQ8IXX5 376 aa9.79□□□□□ -0.84
SPG7-205ENST00000561945 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
SPG7-205ENST00000561945 PCNPQ8WW12 178 aaKnown RBP9.79□□□□□ -0.84
SPG7-205ENST00000561945 ATP5SQ99766 215 aa9.79□□□□□ -0.84
SPG7-205ENST00000561945 SRRM2Q9UQ35 2752 aaKnown RBP9.79□□□□□ -0.84
SPG7-205ENST00000561945 IGHV3-16A0A0C4DH30 117 aa9.78□□□□□ -0.84
SPG7-205ENST00000561945 M0R2P5 195 aa9.78□□□□□ -0.84
SPG7-205ENST00000561945 GCSHP23434 173 aa9.78□□□□□ -0.84
SPG7-205ENST00000561945 FRZBQ92765 325 aa9.78□□□□□ -0.84
SPG7-205ENST00000561945 OTORQ9NRC9 128 aa9.78□□□□□ -0.84
SPG7-205ENST00000561945 CRYGDP07320 174 aa9.77□□□□□ -0.85
SPG7-205ENST00000561945 TAS2R45P59539 299 aa9.77□□□□□ -0.85
SPG7-205ENST00000561945 LINC01556Q5JQF7 62 aa9.77□□□□□ -0.85
SPG7-205ENST00000561945 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.85
SPG7-205ENST00000561945 BOLA1Q9Y3E2 137 aa9.77□□□□□ -0.85
SPG7-205ENST00000561945 GNRH2O43555 120 aa9.76□□□□□ -0.85
SPG7-205ENST00000561945 CIDEAO60543 219 aa9.76□□□□□ -0.85
SPG7-205ENST00000561945 TYMSP04818 313 aa9.76□□□□□ -0.85
SPG7-205ENST00000561945 GATA1P15976 413 aaPredicted RBP9.76□□□□□ -0.85
SPG7-205ENST00000561945 INO80EQ8NBZ0 244 aaPredicted RBP9.76□□□□□ -0.85
SPG7-205ENST00000561945 OR4C5Q8NGB2 326 aa9.76□□□□□ -0.85
SPG7-205ENST00000561945 TVP23CQ96ET8 276 aa9.76□□□□□ -0.85
SPG7-205ENST00000561945 TMEM70Q9BUB7 260 aa9.76□□□□□ -0.85
SPG7-205ENST00000561945 SMIM3Q9BZL3 60 aa9.76□□□□□ -0.85
SPG7-205ENST00000561945 HMCN2Q8NDA2 5059 aa9.75□□□□□ -0.85
SPG7-205ENST00000561945 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
SPG7-205ENST00000561945 IGHV3-38A0A0C4DH36 116 aa9.75□□□□□ -0.85
SPG7-205ENST00000561945 IBA57-AS1B1ANH7 110 aa9.75□□□□□ -0.85
SPG7-205ENST00000561945 FFAR4Q5NUL3 377 aa9.75□□□□□ -0.85
SPG7-205ENST00000561945 KCNS1Q96KK3 526 aa9.75□□□□□ -0.85
SPG7-205ENST00000561945 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
SPG7-205ENST00000561945 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
SPG7-205ENST00000561945 FAM74A1Q5RGS3 127 aa9.74□□□□□ -0.85
SPG7-205ENST00000561945 PQLC2Q6ZP29 291 aa9.74□□□□□ -0.85
SPG7-205ENST00000561945 OR2T35Q8NGX2 323 aa9.74□□□□□ -0.85
SPG7-205ENST00000561945 PTH2Q96A98 100 aa9.74□□□□□ -0.85
SPG7-205ENST00000561945 AQP10Q96PS8 301 aa9.74□□□□□ -0.85
SPG7-205ENST00000561945 TRBV6-4A0A1B0GX49 114 aa9.73□□□□□ -0.85
SPG7-205ENST00000561945 PGPA6NDG6 321 aa9.73□□□□□ -0.85
SPG7-205ENST00000561945 C1QBP02746 253 aa9.73□□□□□ -0.85
SPG7-205ENST00000561945 CMTM2Q8TAZ6 248 aa9.73□□□□□ -0.85
SPG7-205ENST00000561945 FXYD6-FXYD2A0A087WZ82 144 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 RS1O15537 224 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 PFN1P07737 140 aaKnown RBP9.72□□□□□ -0.85
SPG7-205ENST00000561945 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 Q8N814 137 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 SUN5Q8TC36 379 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 HYLS1Q96M11 299 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 WFDC1Q9HC57 220 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 TREM1Q9NP99 234 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 NAGKQ9UJ70 344 aa9.72□□□□□ -0.85
SPG7-205ENST00000561945 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.85
SPG7-205ENST00000561945 IGLV5-52A0A0A0MRZ9 124 aa9.71□□□□□ -0.86
SPG7-205ENST00000561945 SERTM2A0A1B0GWG4 89 aa9.71□□□□□ -0.86
SPG7-205ENST00000561945 LAGE3Q14657 143 aa9.71□□□□□ -0.86
SPG7-205ENST00000561945 ACOT6Q3I5F7 207 aaPredicted RBP9.71□□□□□ -0.86
SPG7-205ENST00000561945 Q5BKY6 102 aa9.71□□□□□ -0.86
SPG7-205ENST00000561945 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
SPG7-205ENST00000561945 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 TRAV8-6A0A0B4J262 113 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 FBLL1A6NHQ2 334 aaKnown RBP9.7□□□□□ -0.86
SPG7-205ENST00000561945 F6UZH7 168 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 SMR3BP02814 79 aaPredicted RBP9.7□□□□□ -0.86
SPG7-205ENST00000561945 PPT1P50897 306 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 HAMPP81172 84 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 TNFSF18Q9UNG2 199 aa9.7□□□□□ -0.86
SPG7-205ENST00000561945 BORCS7-ASMTA0A0B4J1R7 106 aa9.69□□□□□ -0.86
SPG7-205ENST00000561945 PSCAO43653 123 aa9.69□□□□□ -0.86
SPG7-205ENST00000561945 EIF3GO75821 320 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPG7-205ENST00000561945 ZNF80P51504 273 aaPredicted RBP9.69□□□□□ -0.86
SPG7-205ENST00000561945 RHOHQ15669 191 aa9.69□□□□□ -0.86
SPG7-205ENST00000561945 LELP1Q5T871 98 aa9.69□□□□□ -0.86
SPG7-205ENST00000561945 DPPA3Q6W0C5 159 aa9.69□□□□□ -0.86
SPG7-205ENST00000561945 NHLRC2Q8NBF2 726 aa9.69□□□□□ -0.86
SPG7-205ENST00000561945 A0A1W2PPV4 95 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 IGLV2-11P01706 119 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 TCRAP04437 139 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 STAG3L2P0CL84 134 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 STAG3L3P0CL85 134 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 RAB2AP61019 212 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 GNG5P63218 68 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 Q6ZSA8 131 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 Q6ZSN1 163 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 HSD17B11Q8NBQ5 300 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 OR2G3Q8NGZ4 309 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 PRADC1Q9BSG0 188 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 RPH3ALQ9UNE2 315 aa9.68□□□□□ -0.86
SPG7-205ENST00000561945 TAAR5O14804 337 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms