RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 LINC00476Q8WZB0 136 aa16.52■□□□□ 0.24
SMPD3-202ENST00000561749 MRPL16Q9NX20 251 aaKnown RBP16.52■□□□□ 0.24
SMPD3-202ENST00000561749 DYNC2H1Q8NCM8 4307 aaKnown RBP16.52■□□□□ 0.23
SMPD3-202ENST00000561749 LY6G6CO95867 125 aa16.51■□□□□ 0.23
SMPD3-202ENST00000561749 TYMSP04818 313 aa16.51■□□□□ 0.23
SMPD3-202ENST00000561749 TDRG1Q3Y452 100 aa16.51■□□□□ 0.23
SMPD3-202ENST00000561749 SDF2L1Q9HCN8 221 aa16.51■□□□□ 0.23
SMPD3-202ENST00000561749 PLECQ15149 4684 aaKnown RBP16.51■□□□□ 0.23
SMPD3-202ENST00000561749 SPINK4O60575 86 aa16.5■□□□□ 0.23
SMPD3-202ENST00000561749 NHLRC2Q8NBF2 726 aa16.5■□□□□ 0.23
SMPD3-202ENST00000561749 ZC2HC1AQ96GY0 325 aa16.5■□□□□ 0.23
SMPD3-202ENST00000561749 TRBV6-1A0A0K0K1D8 114 aa16.49■□□□□ 0.23
SMPD3-202ENST00000561749 IFNA1P01562 189 aa16.49■□□□□ 0.23
SMPD3-202ENST00000561749 TMEM88Q6PEY1 159 aa16.49■□□□□ 0.23
SMPD3-202ENST00000561749 NDUFAF3Q9BU61 184 aa16.49■□□□□ 0.23
SMPD3-202ENST00000561749 ZFP30Q9Y2G7 519 aa16.49■□□□□ 0.23
SMPD3-202ENST00000561749 TRGV2A0A075B6R0 118 aa16.48■□□□□ 0.23
SMPD3-202ENST00000561749 IGHV3-16A0A0C4DH30 117 aa16.48■□□□□ 0.23
SMPD3-202ENST00000561749 LTAP01374 205 aa16.48■□□□□ 0.23
SMPD3-202ENST00000561749 TCTAP57738 103 aa16.48■□□□□ 0.23
SMPD3-202ENST00000561749 BLOC1S1P78537 153 aa16.48■□□□□ 0.23
SMPD3-202ENST00000561749 KCNS1Q96KK3 526 aa16.48■□□□□ 0.23
SMPD3-202ENST00000561749 BCL2P10415 239 aa16.47■□□□□ 0.23
SMPD3-202ENST00000561749 FABP5P3A8MUU1 101 aa16.46■□□□□ 0.23
SMPD3-202ENST00000561749 CRIP1P50238 77 aa16.46■□□□□ 0.23
SMPD3-202ENST00000561749 MEF2BQ02080 365 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-202ENST00000561749 DERL1Q9BUN8 251 aa16.46■□□□□ 0.23
SMPD3-202ENST00000561749 ALMS1Q8TCU4 4167 aa16.45■□□□□ 0.22
SMPD3-202ENST00000561749 SH2D1AO60880 128 aa16.45■□□□□ 0.22
SMPD3-202ENST00000561749 S100A9P06702 114 aaKnown RBP16.45■□□□□ 0.22
SMPD3-202ENST00000561749 HOXA5P20719 270 aa16.45■□□□□ 0.22
SMPD3-202ENST00000561749 OR5I1Q13606 314 aa16.45■□□□□ 0.22
SMPD3-202ENST00000561749 C11orf52Q96A22 123 aa16.45■□□□□ 0.22
SMPD3-202ENST00000561749 IGHV3-53P01767 116 aa16.44■□□□□ 0.22
SMPD3-202ENST00000561749 RPL35P42766 123 aaKnown RBP16.44■□□□□ 0.22
SMPD3-202ENST00000561749 LGALS9BQ3B8N2 356 aa16.44■□□□□ 0.22
SMPD3-202ENST00000561749 BAGE2Q86Y30 109 aa16.44■□□□□ 0.22
SMPD3-202ENST00000561749 FAM210BQ96KR6 192 aa16.44■□□□□ 0.22
SMPD3-202ENST00000561749 TXNDC17Q9BRA2 123 aa16.44■□□□□ 0.22
SMPD3-202ENST00000561749 SPXQ9BT56 116 aa16.44■□□□□ 0.22
SMPD3-202ENST00000561749 VAX2Q9UIW0 290 aa16.44■□□□□ 0.22
SMPD3-202ENST00000561749 MUC4Q99102 2169 aa16.43■□□□□ 0.22
SMPD3-202ENST00000561749 IGKV3D-20A0A0C4DH25 116 aa16.43■□□□□ 0.22
SMPD3-202ENST00000561749 M0R036 132 aa16.43■□□□□ 0.22
SMPD3-202ENST00000561749 ORM1P02763 201 aa16.43■□□□□ 0.22
SMPD3-202ENST00000561749 COX8CQ7Z4L0 72 aa16.43■□□□□ 0.22
SMPD3-202ENST00000561749 FAM162BQ5T6X4 162 aa16.42■□□□□ 0.22
SMPD3-202ENST00000561749 LGALS9CQ6DKI2 356 aa16.42■□□□□ 0.22
SMPD3-202ENST00000561749 ZNF674Q2M3X9 581 aa16.41■□□□□ 0.22
SMPD3-202ENST00000561749 MED9Q9NWA0 146 aa16.41■□□□□ 0.22
SMPD3-202ENST00000561749 SACSQ9NZJ4 4579 aa16.41■□□□□ 0.22
SMPD3-202ENST00000561749 A0A0J9YY99 117 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 RAB19A4D1S5 217 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 B4DEV8 164 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 M0R2P5 195 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 PDE6DO43924 150 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 LYPD6BQ8NI32 183 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 PCNPQ8WW12 178 aaKnown RBP16.4■□□□□ 0.22
SMPD3-202ENST00000561749 C18orf15Q96N68 181 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 LYSTQ99698 3801 aa16.4■□□□□ 0.22
SMPD3-202ENST00000561749 TRAV26-1A0A087WT03 109 aa16.39■□□□□ 0.21
SMPD3-202ENST00000561749 TMSB15BA0A087X1C1 80 aa16.39■□□□□ 0.21
SMPD3-202ENST00000561749 NUDT3O95989 172 aa16.39■□□□□ 0.21
SMPD3-202ENST00000561749 CENPWQ5EE01 88 aa16.39■□□□□ 0.21
SMPD3-202ENST00000561749 MLST8Q9BVC4 326 aa16.39■□□□□ 0.21
SMPD3-202ENST00000561749 NACAE9PAV3 2078 aa16.39■□□□□ 0.21
SMPD3-202ENST00000561749 GRIFINA4D1Z8 144 aa16.38■□□□□ 0.21
SMPD3-202ENST00000561749 C9JCJ5 164 aa16.38■□□□□ 0.21
SMPD3-202ENST00000561749 SFTA3P0C7M3 94 aa16.38■□□□□ 0.21
SMPD3-202ENST00000561749 RNASE3P12724 160 aaKnown RBP16.38■□□□□ 0.21
SMPD3-202ENST00000561749 TAGLN2P37802 199 aaKnown RBP16.38■□□□□ 0.21
SMPD3-202ENST00000561749 PRR27Q6MZM9 219 aa16.38■□□□□ 0.21
SMPD3-202ENST00000561749 RASL10AQ92737 203 aa16.38■□□□□ 0.21
SMPD3-202ENST00000561749 C9orf85Q96MD7 179 aa16.38■□□□□ 0.21
SMPD3-202ENST00000561749 RYR2Q92736 4967 aa16.38■□□□□ 0.21
SMPD3-202ENST00000561749 RBFOX3A6NFN3 312 aa16.37■□□□□ 0.21
SMPD3-202ENST00000561749 KRBOX1C9JBD0 128 aa16.37■□□□□ 0.21
SMPD3-202ENST00000561749 S100A4P26447 101 aaKnown RBP16.37■□□□□ 0.21
SMPD3-202ENST00000561749 ASIPP42127 132 aa16.37■□□□□ 0.21
SMPD3-202ENST00000561749 TEX261Q6UWH6 196 aa16.37■□□□□ 0.21
SMPD3-202ENST00000561749 C15orf53Q8NAA6 179 aa16.37■□□□□ 0.21
SMPD3-202ENST00000561749 RYR3Q15413 4870 aa16.37■□□□□ 0.21
SMPD3-202ENST00000561749 TOR2AQ5JU69 321 aa16.36■□□□□ 0.21
SMPD3-202ENST00000561749 DNAH1Q9P2D7 4330 aa16.36■□□□□ 0.21
SMPD3-202ENST00000561749 H3BVH4 76 aa16.35■□□□□ 0.21
SMPD3-202ENST00000561749 MGST1P10620 155 aaKnown RBP16.35■□□□□ 0.21
SMPD3-202ENST00000561749 GNG4P50150 75 aa16.35■□□□□ 0.21
SMPD3-202ENST00000561749 RPL19P84098 196 aaKnown RBP16.35■□□□□ 0.21
SMPD3-202ENST00000561749 LINC01559Q495D7 138 aa16.35■□□□□ 0.21
SMPD3-202ENST00000561749 ZNF506Q5JVG8 444 aa16.35■□□□□ 0.21
SMPD3-202ENST00000561749 POM121L12Q8N7R1 296 aa16.35■□□□□ 0.21
SMPD3-202ENST00000561749 ZNF479Q96JC4 524 aa16.35■□□□□ 0.21
SMPD3-202ENST00000561749 PGPEP1LA6NFU8 196 aa16.34■□□□□ 0.21
SMPD3-202ENST00000561749 IGLV2-8P01709 118 aa16.34■□□□□ 0.21
SMPD3-202ENST00000561749 P0DMU3 169 aa16.34■□□□□ 0.21
SMPD3-202ENST00000561749 FAM231AP0DMU4 169 aa16.34■□□□□ 0.21
SMPD3-202ENST00000561749 FAM231CP0DMU5 169 aa16.34■□□□□ 0.21
SMPD3-202ENST00000561749 ZNF876PQ49A33 203 aa16.34■□□□□ 0.21
SMPD3-202ENST00000561749 TRBV20OR9-2A0A075B6H5 130 aa16.33■□□□□ 0.2
SMPD3-202ENST00000561749 FHL2Q14192 279 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms