RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 CST9LP1Q5W188 147 aa13.16□□□□□ -0.3
PKD1-223ENST00000561668 LYPD6BQ8NI32 183 aa13.16□□□□□ -0.3
PKD1-223ENST00000561668 C18orf15Q96N68 181 aa13.16□□□□□ -0.3
PKD1-223ENST00000561668 BOLA1Q9Y3E2 137 aa13.16□□□□□ -0.3
PKD1-223ENST00000561668 TRGV2A0A075B6R0 118 aa13.15□□□□□ -0.3
PKD1-223ENST00000561668 TRAV34A0A0B4J273 112 aa13.15□□□□□ -0.3
PKD1-223ENST00000561668 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.3
PKD1-223ENST00000561668 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
PKD1-223ENST00000561668 PRNTQ86SH4 94 aa13.15□□□□□ -0.3
PKD1-223ENST00000561668 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
PKD1-223ENST00000561668 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
PKD1-223ENST00000561668 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
PKD1-223ENST00000561668 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
PKD1-223ENST00000561668 FAM159AQ6UWV7 190 aa13.14□□□□□ -0.31
PKD1-223ENST00000561668 Q86TA4 180 aa13.14□□□□□ -0.31
PKD1-223ENST00000561668 TRGV1A0A0A0MS02 117 aa13.13□□□□□ -0.31
PKD1-223ENST00000561668 A0A1B0GV50 99 aa13.13□□□□□ -0.31
PKD1-223ENST00000561668 S100A9P06702 114 aaKnown RBP13.13□□□□□ -0.31
PKD1-223ENST00000561668 PFN1P07737 140 aaKnown RBP13.13□□□□□ -0.31
PKD1-223ENST00000561668 ALKAL2Q6UX46 152 aa13.13□□□□□ -0.31
PKD1-223ENST00000561668 Q6ZTI0 123 aa13.13□□□□□ -0.31
PKD1-223ENST00000561668 C11orf52Q96A22 123 aa13.13□□□□□ -0.31
PKD1-223ENST00000561668 SPINK4O60575 86 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 GCGP01275 180 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 LTAP01374 205 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 MUC21Q5SSG8 566 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 KCNS1Q96KK3 526 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
PKD1-223ENST00000561668 TAGLN2P37802 199 aaKnown RBP13.11□□□□□ -0.31
PKD1-223ENST00000561668 CCL18P55774 89 aa13.11□□□□□ -0.31
PKD1-223ENST00000561668 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
PKD1-223ENST00000561668 GNG13Q9P2W3 67 aa13.11□□□□□ -0.31
PKD1-223ENST00000561668 TRGV11A0A075B6L2 103 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 SCO2A0A1W2PP80 73 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 M0R2N4 97 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 CRIP1P50238 77 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 FAM3BP58499 235 aaPredicted RBP13.1□□□□□ -0.31
PKD1-223ENST00000561668 SPXQ9BT56 116 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 MLST8Q9BVC4 326 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
PKD1-223ENST00000561668 FABP5P3A8MUU1 101 aa13.09□□□□□ -0.31
PKD1-223ENST00000561668 AKR1C3P42330 323 aa13.09□□□□□ -0.31
PKD1-223ENST00000561668 UBE2G1P62253 170 aa13.09□□□□□ -0.31
PKD1-223ENST00000561668 TMEM183AQ8IXX5 376 aa13.09□□□□□ -0.31
PKD1-223ENST00000561668 NAGKQ9UJ70 344 aa13.09□□□□□ -0.31
PKD1-223ENST00000561668 IGHV3-16A0A0C4DH30 117 aa13.08□□□□□ -0.32
PKD1-223ENST00000561668 A0A0J9YY99 117 aa13.08□□□□□ -0.32
PKD1-223ENST00000561668 GNRH2O43555 120 aa13.08□□□□□ -0.32
PKD1-223ENST00000561668 TYMSP04818 313 aa13.08□□□□□ -0.32
PKD1-223ENST00000561668 BCL2P10415 239 aa13.08□□□□□ -0.32
PKD1-223ENST00000561668 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
PKD1-223ENST00000561668 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
PKD1-223ENST00000561668 ZC2HC1AQ96GY0 325 aa13.08□□□□□ -0.32
PKD1-223ENST00000561668 IGLV2-18A0A075B6J9 118 aa13.07□□□□□ -0.32
PKD1-223ENST00000561668 IFNA1P01562 189 aa13.07□□□□□ -0.32
PKD1-223ENST00000561668 HOXA5P20719 270 aa13.07□□□□□ -0.32
PKD1-223ENST00000561668 ZNF575Q86XF7 245 aa13.07□□□□□ -0.32
PKD1-223ENST00000561668 RASL10AQ92737 203 aa13.07□□□□□ -0.32
PKD1-223ENST00000561668 SDF2L1Q9HCN8 221 aa13.07□□□□□ -0.32
PKD1-223ENST00000561668 VAX2Q9UIW0 290 aa13.07□□□□□ -0.32
PKD1-223ENST00000561668 IGKV3D-20A0A0C4DH25 116 aa13.06□□□□□ -0.32
PKD1-223ENST00000561668 H3BNG1 76 aa13.06□□□□□ -0.32
PKD1-223ENST00000561668 PDE6DO43924 150 aa13.06□□□□□ -0.32
PKD1-223ENST00000561668 NDUFS6O75380 124 aaKnown RBP13.06□□□□□ -0.32
PKD1-223ENST00000561668 DNLZQ5SXM8 178 aa13.06□□□□□ -0.32
PKD1-223ENST00000561668 PTH2Q96A98 100 aa13.06□□□□□ -0.32
PKD1-223ENST00000561668 EPPK1P58107 5090 aaKnown RBP13.05□□□□□ -0.32
PKD1-223ENST00000561668 MRPL16Q9NX20 251 aaKnown RBP13.05□□□□□ -0.32
PKD1-223ENST00000561668 RPL35P42766 123 aaKnown RBP13.04□□□□□ -0.32
PKD1-223ENST00000561668 SLAQ13239 276 aa13.04□□□□□ -0.32
PKD1-223ENST00000561668 TEX261Q6UWH6 196 aa13.04□□□□□ -0.32
PKD1-223ENST00000561668 LINC00336Q6ZUF6 198 aa13.04□□□□□ -0.32
PKD1-223ENST00000561668 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
PKD1-223ENST00000561668 SOHLH1Q5JUK2 328 aa13.03□□□□□ -0.32
PKD1-223ENST00000561668 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
PKD1-223ENST00000561668 BAGE2Q86Y30 109 aa13.03□□□□□ -0.32
PKD1-223ENST00000561668 SMIM12Q96EX1 92 aa13.03□□□□□ -0.32
PKD1-223ENST00000561668 MUC4Q99102 2169 aa13.03□□□□□ -0.32
PKD1-223ENST00000561668 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.32
PKD1-223ENST00000561668 KRBOX1C9JBD0 128 aa13.02□□□□□ -0.33
PKD1-223ENST00000561668 M0R2P5 195 aa13.02□□□□□ -0.33
PKD1-223ENST00000561668 SH2D1AO60880 128 aa13.02□□□□□ -0.33
PKD1-223ENST00000561668 IGLV2-8P01709 118 aa13.02□□□□□ -0.33
PKD1-223ENST00000561668 IGHV3-53P01767 116 aa13.02□□□□□ -0.33
PKD1-223ENST00000561668 RNASE3P12724 160 aaKnown RBP13.02□□□□□ -0.33
PKD1-223ENST00000561668 LINC01559Q495D7 138 aa13.02□□□□□ -0.33
PKD1-223ENST00000561668 DERL1Q9BUN8 251 aa13.02□□□□□ -0.33
PKD1-223ENST00000561668 TRGV4A0A0C4DH28 118 aa13.01□□□□□ -0.33
PKD1-223ENST00000561668 PAX4O43316 350 aa13.01□□□□□ -0.33
PKD1-223ENST00000561668 ZNF506Q5JVG8 444 aa13.01□□□□□ -0.33
PKD1-223ENST00000561668 PIK3CD-AS1Q5SR53 167 aa13.01□□□□□ -0.33
PKD1-223ENST00000561668 PRO0255Q9UI72 69 aa13.01□□□□□ -0.33
PKD1-223ENST00000561668 HHLA3Q9XRX5 114 aa13.01□□□□□ -0.33
PKD1-223ENST00000561668 LINC00588Q9Y4M8 146 aa13.01□□□□□ -0.33
PKD1-223ENST00000561668 KMT2AQ03164 3969 aa13□□□□□ -0.33
PKD1-223ENST00000561668 RBFOX3A6NFN3 312 aa13□□□□□ -0.33
PKD1-223ENST00000561668 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms