RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 FGF8P55075 233 aaPredicted RBP16.5■□□□□ 0.23
CDR2-202ENST00000561630 SLAQ13239 276 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 FHL2Q14192 279 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 SOHLH1Q5JUK2 328 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 C1orf134Q5TEV5 83 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 SDF2L1Q9HCN8 221 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 PRO0255Q9UI72 69 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 MAP1LC3B2A6NCE7 125 aa16.49■□□□□ 0.23
CDR2-202ENST00000561630 PAX4O43316 350 aa16.49■□□□□ 0.23
CDR2-202ENST00000561630 TYMSP04818 313 aa16.49■□□□□ 0.23
CDR2-202ENST00000561630 ZNF80P51504 273 aaPredicted RBP16.49■□□□□ 0.23
CDR2-202ENST00000561630 UBE2G2P60604 165 aa16.49■□□□□ 0.23
CDR2-202ENST00000561630 PRNTQ86SH4 94 aa16.49■□□□□ 0.23
CDR2-202ENST00000561630 NKX6-2Q9C056 277 aaPredicted RBP16.49■□□□□ 0.23
CDR2-202ENST00000561630 MAP1LC3BQ9GZQ8 125 aa16.49■□□□□ 0.23
CDR2-202ENST00000561630 PKD1P98161 4303 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 A0A1B0GVY2 172 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 FAM74A7A6NL05 159 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 GCGP01275 180 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 IFNA7P01567 189 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 SAPCD1Q5SSQ6 148 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 UPK3BQ9BT76 320 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 Q9H8V8 135 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 HHLA3Q9XRX5 114 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 PKHD1P08F94 4074 aa16.48■□□□□ 0.23
CDR2-202ENST00000561630 A0A0D9SG52 128 aa16.47■□□□□ 0.23
CDR2-202ENST00000561630 M0R2P5 195 aa16.47■□□□□ 0.23
CDR2-202ENST00000561630 PFN1P07737 140 aaKnown RBP16.47■□□□□ 0.23
CDR2-202ENST00000561630 CRYBA4P53673 196 aa16.47■□□□□ 0.23
CDR2-202ENST00000561630 ZFP69Q49AA0 526 aa16.47■□□□□ 0.23
CDR2-202ENST00000561630 SMUG1Q53HV7 270 aa16.47■□□□□ 0.23
CDR2-202ENST00000561630 LINC00479Q96M42 142 aa16.47■□□□□ 0.23
CDR2-202ENST00000561630 C11orf21Q9P2W6 132 aa16.47■□□□□ 0.23
CDR2-202ENST00000561630 MRPS16Q9Y3D3 137 aaKnown RBP16.47■□□□□ 0.23
CDR2-202ENST00000561630 ZNF479Q96JC4 524 aa16.46■□□□□ 0.23
CDR2-202ENST00000561630 TRAV34A0A0B4J273 112 aa16.45■□□□□ 0.22
CDR2-202ENST00000561630 BCL2L11O43521 198 aa16.45■□□□□ 0.22
CDR2-202ENST00000561630 SFTA3P0C7M3 94 aa16.45■□□□□ 0.22
CDR2-202ENST00000561630 SEC11BP0C7V7 166 aa16.45■□□□□ 0.22
CDR2-202ENST00000561630 FHITP49789 147 aa16.45■□□□□ 0.22
CDR2-202ENST00000561630 HIST1H2BAQ96A08 127 aa16.45■□□□□ 0.22
CDR2-202ENST00000561630 ICOSQ9Y6W8 199 aa16.45■□□□□ 0.22
CDR2-202ENST00000561630 TRGV4A0A0C4DH28 118 aa16.44■□□□□ 0.22
CDR2-202ENST00000561630 PEX7O00628 323 aa16.44■□□□□ 0.22
CDR2-202ENST00000561630 PPT1P50897 306 aa16.44■□□□□ 0.22
CDR2-202ENST00000561630 STOML3Q8TAV4 291 aa16.44■□□□□ 0.22
CDR2-202ENST00000561630 TRAV4A0A0B4J268 109 aa16.43■□□□□ 0.22
CDR2-202ENST00000561630 KANTRA0A1W2PQU2 76 aa16.43■□□□□ 0.22
CDR2-202ENST00000561630 ZNF471Q9BX82 626 aaPredicted RBP16.43■□□□□ 0.22
CDR2-202ENST00000561630 ARL2-SNX15V9GYD0 113 aa16.43■□□□□ 0.22
CDR2-202ENST00000561630 UMAD1C9J7I0 102 aa16.42■□□□□ 0.22
CDR2-202ENST00000561630 MRPL23Q16540 153 aaKnown RBP16.41■□□□□ 0.22
CDR2-202ENST00000561630 C6orf223Q8N319 242 aa16.41■□□□□ 0.22
CDR2-202ENST00000561630 OR4C5Q8NGB2 326 aa16.41■□□□□ 0.22
CDR2-202ENST00000561630 DNAH11Q96DT5 4516 aa16.4■□□□□ 0.22
CDR2-202ENST00000561630 TTC32Q5I0X7 151 aa16.4■□□□□ 0.22
CDR2-202ENST00000561630 Q86TA4 180 aa16.4■□□□□ 0.22
CDR2-202ENST00000561630 MBD3L1Q8WWY6 194 aa16.4■□□□□ 0.22
CDR2-202ENST00000561630 TCEAL7Q9BRU2 100 aa16.4■□□□□ 0.22
CDR2-202ENST00000561630 HERC2O95714 4834 aa16.4■□□□□ 0.22
CDR2-202ENST00000561630 KIAA1109Q2LD37 5005 aa16.39■□□□□ 0.21
CDR2-202ENST00000561630 EIF5AP63241 154 aaKnown RBP16.39■□□□□ 0.21
CDR2-202ENST00000561630 TMUB2Q71RG4 321 aa16.39■□□□□ 0.21
CDR2-202ENST00000561630 FAM213BQ8TBF2 198 aa16.39■□□□□ 0.21
CDR2-202ENST00000561630 SFT2D1Q8WV19 159 aa16.39■□□□□ 0.21
CDR2-202ENST00000561630 C9orf85Q96MD7 179 aa16.39■□□□□ 0.21
CDR2-202ENST00000561630 KRTAP1-5Q9BYS1 174 aa16.39■□□□□ 0.21
CDR2-202ENST00000561630 A0A1W2PPQ1 181 aa16.38■□□□□ 0.21
CDR2-202ENST00000561630 ZNF876PQ49A33 203 aa16.38■□□□□ 0.21
CDR2-202ENST00000561630 CST9LP1Q5W188 147 aa16.38■□□□□ 0.21
CDR2-202ENST00000561630 DPPA3Q6W0C5 159 aa16.38■□□□□ 0.21
CDR2-202ENST00000561630 DYNC1H1Q14204 4646 aaKnown RBP16.38■□□□□ 0.21
CDR2-202ENST00000561630 FABP5P3A8MUU1 101 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 C9JCJ5 164 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 K7EQD1 137 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 PFDN1O60925 122 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 ORM1P02763 201 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 NEGR1Q7Z3B1 354 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 COX8CQ7Z4L0 72 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 FMC1Q96HJ9 113 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 ZFP30Q9Y2G7 519 aa16.37■□□□□ 0.21
CDR2-202ENST00000561630 IGKV3D-20A0A0C4DH25 116 aa16.36■□□□□ 0.21
CDR2-202ENST00000561630 RNASE3P12724 160 aaKnown RBP16.36■□□□□ 0.21
CDR2-202ENST00000561630 LYPD5Q6UWN5 251 aa16.36■□□□□ 0.21
CDR2-202ENST00000561630 PTH2Q96A98 100 aa16.36■□□□□ 0.21
CDR2-202ENST00000561630 PAGE4O60829 102 aa16.35■□□□□ 0.21
CDR2-202ENST00000561630 TPT1P13693 172 aaKnown RBP16.35■□□□□ 0.21
CDR2-202ENST00000561630 GYPEP15421 78 aa16.35■□□□□ 0.21
CDR2-202ENST00000561630 SRIP30626 198 aa16.35■□□□□ 0.21
CDR2-202ENST00000561630 PCNPQ8WW12 178 aaKnown RBP16.35■□□□□ 0.21
CDR2-202ENST00000561630 TRBV6-1A0A0K0K1D8 114 aa16.34■□□□□ 0.21
CDR2-202ENST00000561630 NXPH4O95158 308 aa16.34■□□□□ 0.21
CDR2-202ENST00000561630 GATA1P15976 413 aaPredicted RBP16.34■□□□□ 0.21
CDR2-202ENST00000561630 CRIP1P50238 77 aa16.34■□□□□ 0.21
CDR2-202ENST00000561630 UBE2G1P62253 170 aa16.34■□□□□ 0.21
CDR2-202ENST00000561630 CFAP126Q5VTH2 177 aa16.34■□□□□ 0.21
CDR2-202ENST00000561630 ZC2HC1AQ96GY0 325 aa16.34■□□□□ 0.21
CDR2-202ENST00000561630 SIVA1O15304 175 aa16.33■□□□□ 0.2
CDR2-202ENST00000561630 RS1O15537 224 aa16.33■□□□□ 0.2
CDR2-202ENST00000561630 CIDEAO60543 219 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms