RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 RPH3ALQ9UNE2 315 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 A0A0J9YY99 117 aa14.33□□□□□ -0.12
TPM1-232ENST00000561425 MAP1LC3B2A6NCE7 125 aa14.33□□□□□ -0.12
TPM1-232ENST00000561425 FAM159AQ6UWV7 190 aa14.33□□□□□ -0.12
TPM1-232ENST00000561425 RASL10AQ92737 203 aa14.33□□□□□ -0.12
TPM1-232ENST00000561425 SPXQ9BT56 116 aa14.33□□□□□ -0.12
TPM1-232ENST00000561425 MAP1LC3BQ9GZQ8 125 aa14.33□□□□□ -0.12
TPM1-232ENST00000561425 TREM1Q9NP99 234 aa14.33□□□□□ -0.12
TPM1-232ENST00000561425 HECTD4Q9Y4D8 3996 aa14.32□□□□□ -0.12
TPM1-232ENST00000561425 TRAV21A0A0B4J279 112 aa14.32□□□□□ -0.12
TPM1-232ENST00000561425 IQCF2Q8IXL9 164 aa14.32□□□□□ -0.12
TPM1-232ENST00000561425 MRPL16Q9NX20 251 aaKnown RBP14.32□□□□□ -0.12
TPM1-232ENST00000561425 TRGV11A0A075B6L2 103 aa14.31□□□□□ -0.12
TPM1-232ENST00000561425 H2AFB1P0C5Y9 115 aa14.31□□□□□ -0.12
TPM1-232ENST00000561425 ESRGQ1W209 222 aa14.31□□□□□ -0.12
TPM1-232ENST00000561425 SFT2D1Q8WV19 159 aa14.31□□□□□ -0.12
TPM1-232ENST00000561425 UPK3BQ9BT76 320 aa14.31□□□□□ -0.12
TPM1-232ENST00000561425 A0A096LPF7 62 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 IGHV3-16A0A0C4DH30 117 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 FBLL1A6NHQ2 334 aaKnown RBP14.3□□□□□ -0.12
TPM1-232ENST00000561425 TEX46H3BTG2 121 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 FGF8P55075 233 aaPredicted RBP14.3□□□□□ -0.12
TPM1-232ENST00000561425 FHL2Q14192 279 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 TMEM183BQ1AE95 376 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 TMEM183AQ8IXX5 376 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 MBD3L1Q8WWY6 194 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 SGK494Q96LW2 274 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 PSG8Q9UQ74 426 aa14.3□□□□□ -0.12
TPM1-232ENST00000561425 NBDYA0A0U1RRE5 68 aa14.29□□□□□ -0.12
TPM1-232ENST00000561425 F6UZH7 168 aa14.29□□□□□ -0.12
TPM1-232ENST00000561425 GNRH2O43555 120 aa14.29□□□□□ -0.12
TPM1-232ENST00000561425 ZNF80P51504 273 aaPredicted RBP14.29□□□□□ -0.12
TPM1-232ENST00000561425 BLOC1S1P78537 153 aa14.29□□□□□ -0.12
TPM1-232ENST00000561425 CYB561D1Q8N8Q1 229 aa14.29□□□□□ -0.12
TPM1-232ENST00000561425 TMEM75Q8N9X5 138 aa14.29□□□□□ -0.12
TPM1-232ENST00000561425 MUC4Q99102 2169 aa14.29□□□□□ -0.12
TPM1-232ENST00000561425 A0A1B0GV50 99 aa14.28□□□□□ -0.12
TPM1-232ENST00000561425 PRSS29PA6NIE9 313 aa14.28□□□□□ -0.12
TPM1-232ENST00000561425 K7EQM0 130 aa14.28□□□□□ -0.12
TPM1-232ENST00000561425 FLI1Q01543 452 aaPredicted RBP14.28□□□□□ -0.12
TPM1-232ENST00000561425 SLAQ13239 276 aa14.28□□□□□ -0.12
TPM1-232ENST00000561425 PRO0255Q9UI72 69 aa14.28□□□□□ -0.12
TPM1-232ENST00000561425 TYMSP04818 313 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 CRYBA4P53673 196 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 C1orf134Q5TEV5 83 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 KCNS1Q96KK3 526 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 C8orf49Q96NF6 230 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 NDFIP1Q9BT67 221 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 NKX6-2Q9C056 277 aaPredicted RBP14.27□□□□□ -0.13
TPM1-232ENST00000561425 Q9H8V8 135 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 C11orf21Q9P2W6 132 aa14.27□□□□□ -0.13
TPM1-232ENST00000561425 FAM74A7A6NL05 159 aa14.26□□□□□ -0.13
TPM1-232ENST00000561425 HHLA3Q9XRX5 114 aa14.26□□□□□ -0.13
TPM1-232ENST00000561425 MRPS16Q9Y3D3 137 aaKnown RBP14.26□□□□□ -0.13
TPM1-232ENST00000561425 M0R2P5 195 aa14.25□□□□□ -0.13
TPM1-232ENST00000561425 PAX4O43316 350 aa14.25□□□□□ -0.13
TPM1-232ENST00000561425 IGHV3-53P01767 116 aa14.25□□□□□ -0.13
TPM1-232ENST00000561425 SAPCD1Q5SSQ6 148 aa14.25□□□□□ -0.13
TPM1-232ENST00000561425 SDF2L1Q9HCN8 221 aa14.25□□□□□ -0.13
TPM1-232ENST00000561425 NAGKQ9UJ70 344 aa14.25□□□□□ -0.13
TPM1-232ENST00000561425 TRAV1-1A0A0B4J248 108 aa14.24□□□□□ -0.13
TPM1-232ENST00000561425 PFN1P07737 140 aaKnown RBP14.24□□□□□ -0.13
TPM1-232ENST00000561425 IFITM2Q01629 132 aa14.24□□□□□ -0.13
TPM1-232ENST00000561425 SMUG1Q53HV7 270 aa14.24□□□□□ -0.13
TPM1-232ENST00000561425 SOHLH1Q5JUK2 328 aa14.24□□□□□ -0.13
TPM1-232ENST00000561425 PRNTQ86SH4 94 aa14.24□□□□□ -0.13
TPM1-232ENST00000561425 ZNF479Q96JC4 524 aa14.24□□□□□ -0.13
TPM1-232ENST00000561425 LINC00479Q96M42 142 aa14.24□□□□□ -0.13
TPM1-232ENST00000561425 GCGP01275 180 aa14.23□□□□□ -0.13
TPM1-232ENST00000561425 PPT1P50897 306 aa14.23□□□□□ -0.13
TPM1-232ENST00000561425 RAB14P61106 215 aa14.23□□□□□ -0.13
TPM1-232ENST00000561425 HIST1H2BAQ96A08 127 aa14.23□□□□□ -0.13
TPM1-232ENST00000561425 TRAV4A0A0B4J268 109 aa14.22□□□□□ -0.13
TPM1-232ENST00000561425 COX8CQ7Z4L0 72 aa14.22□□□□□ -0.13
TPM1-232ENST00000561425 PTH2Q96A98 100 aa14.22□□□□□ -0.13
TPM1-232ENST00000561425 ICOSQ9Y6W8 199 aa14.22□□□□□ -0.13
TPM1-232ENST00000561425 TRAV34A0A0B4J273 112 aa14.21□□□□□ -0.13
TPM1-232ENST00000561425 PEX7O00628 323 aa14.21□□□□□ -0.13
TPM1-232ENST00000561425 SFTA3P0C7M3 94 aa14.21□□□□□ -0.13
TPM1-232ENST00000561425 UBE2G2P60604 165 aa14.21□□□□□ -0.13
TPM1-232ENST00000561425 PCNPQ8WW12 178 aaKnown RBP14.21□□□□□ -0.13
TPM1-232ENST00000561425 C9orf85Q96MD7 179 aa14.21□□□□□ -0.13
TPM1-232ENST00000561425 ARL2-SNX15V9GYD0 113 aa14.21□□□□□ -0.13
TPM1-232ENST00000561425 A0A1W2PPQ1 181 aa14.2□□□□□ -0.14
TPM1-232ENST00000561425 IFNA1P01562 189 aa14.2□□□□□ -0.14
TPM1-232ENST00000561425 MRPL23Q16540 153 aaKnown RBP14.2□□□□□ -0.14
TPM1-232ENST00000561425 C6orf223Q8N319 242 aa14.2□□□□□ -0.14
TPM1-232ENST00000561425 TCEAL7Q9BRU2 100 aa14.2□□□□□ -0.14
TPM1-232ENST00000561425 KRTAP1-5Q9BYS1 174 aa14.2□□□□□ -0.14
TPM1-232ENST00000561425 MANBALQ9NQG1 85 aa14.2□□□□□ -0.14
TPM1-232ENST00000561425 GNG13Q9P2W3 67 aa14.2□□□□□ -0.14
TPM1-232ENST00000561425 PKD1P98161 4303 aa14.19□□□□□ -0.14
TPM1-232ENST00000561425 TRGV4A0A0C4DH28 118 aa14.19□□□□□ -0.14
TPM1-232ENST00000561425 TRBV6-1A0A0K0K1D8 114 aa14.19□□□□□ -0.14
TPM1-232ENST00000561425 CCL20P78556 96 aa14.19□□□□□ -0.14
TPM1-232ENST00000561425 IGKV3D-20A0A0C4DH25 116 aa14.18□□□□□ -0.14
TPM1-232ENST00000561425 RNASE3P12724 160 aaKnown RBP14.18□□□□□ -0.14
TPM1-232ENST00000561425 BTF3P20290 206 aaKnown RBP14.18□□□□□ -0.14
TPM1-232ENST00000561425 LYPD5Q6UWN5 251 aa14.18□□□□□ -0.14
TPM1-232ENST00000561425 OR4C5Q8NGB2 326 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms