RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SDF2L1Q9HCN8 221 aa11.12□□□□□ -0.63
LMX1B-204ENST00000561065 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
LMX1B-204ENST00000561065 LRP1BQ9NZR2 4599 aa11.12□□□□□ -0.63
LMX1B-204ENST00000561065 FHITP49789 147 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 GNG5P63218 68 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 MUC21Q5SSG8 566 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 Q6ZTI0 123 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 NAGKQ9UJ70 344 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 LINC00588Q9Y4M8 146 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 ARL2-SNX15V9GYD0 113 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 RYR1P21817 5038 aa11.11□□□□□ -0.63
LMX1B-204ENST00000561065 TRAV26-1A0A087WT03 109 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 TRAV8-1A0A0A6YYK1 113 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 RAB5CP51148 216 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 ZNF726P1Q15940 193 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 TMEM183BQ1AE95 376 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 SSX7Q7RTT5 188 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 TMEM183AQ8IXX5 376 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 SFT2D1Q8WV19 159 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 PCLOQ9Y6V0 5065 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 HSPG2P98160 4391 aa11.1□□□□□ -0.63
LMX1B-204ENST00000561065 GGTLC3B5MD39 225 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 FGF8P55075 233 aaPredicted RBP11.09□□□□□ -0.63
LMX1B-204ENST00000561065 UBE2G2P60604 165 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 SOHLH1Q5JUK2 328 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 CST9LP1Q5W188 147 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 TCTE3Q8IZS6 198 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 OR11H4Q8NGC9 324 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 MUC4Q99102 2169 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 A0A0J9YY99 117 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 FAM74A7A6NL05 159 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 S100A9P06702 114 aaKnown RBP11.09□□□□□ -0.63
LMX1B-204ENST00000561065 PFN1P07737 140 aaKnown RBP11.09□□□□□ -0.63
LMX1B-204ENST00000561065 H2AFB1P0C5Y9 115 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 UBE2G1P62253 170 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 FAM213BQ8TBF2 198 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 MBD3L1Q8WWY6 194 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
LMX1B-204ENST00000561065 NBDYA0A0U1RRE5 68 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 FABP5P3A8MUU1 101 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 M0R2P5 195 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 PEX7O00628 323 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 GCGP01275 180 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 RASL10AQ92737 203 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 SGK494Q96LW2 274 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 DNAH5Q8TE73 4624 aa11.08□□□□□ -0.64
LMX1B-204ENST00000561065 CIDEAO60543 219 aa11.07□□□□□ -0.64
LMX1B-204ENST00000561065 Q6ZNX1 250 aa11.07□□□□□ -0.64
LMX1B-204ENST00000561065 TVP23CQ96ET8 276 aa11.07□□□□□ -0.64
LMX1B-204ENST00000561065 FMC1Q96HJ9 113 aa11.07□□□□□ -0.64
LMX1B-204ENST00000561065 KRTAP1-5Q9BYS1 174 aa11.07□□□□□ -0.64
LMX1B-204ENST00000561065 MDFICQ9P1T7 246 aa11.07□□□□□ -0.64
LMX1B-204ENST00000561065 HHLA3Q9XRX5 114 aa11.07□□□□□ -0.64
LMX1B-204ENST00000561065 TRGV4A0A0C4DH28 118 aa11.06□□□□□ -0.64
LMX1B-204ENST00000561065 PAX4O43316 350 aa11.06□□□□□ -0.64
LMX1B-204ENST00000561065 VSIG2Q96IQ7 327 aa11.06□□□□□ -0.64
LMX1B-204ENST00000561065 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
LMX1B-204ENST00000561065 GNRH2O43555 120 aa11.05□□□□□ -0.64
LMX1B-204ENST00000561065 C1QBP02746 253 aa11.05□□□□□ -0.64
LMX1B-204ENST00000561065 TNP2Q05952 138 aa11.05□□□□□ -0.64
LMX1B-204ENST00000561065 AKAP14Q86UN6 197 aa11.05□□□□□ -0.64
LMX1B-204ENST00000561065 ZNF575Q86XF7 245 aa11.05□□□□□ -0.64
LMX1B-204ENST00000561065 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
LMX1B-204ENST00000561065 IGHV3-16A0A0C4DH30 117 aa11.04□□□□□ -0.64
LMX1B-204ENST00000561065 IGLV2-11P01706 119 aa11.04□□□□□ -0.64
LMX1B-204ENST00000561065 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
LMX1B-204ENST00000561065 SLC51BQ86UW2 128 aa11.04□□□□□ -0.64
LMX1B-204ENST00000561065 OR4C5Q8NGB2 326 aa11.04□□□□□ -0.64
LMX1B-204ENST00000561065 PCNPQ8WW12 178 aaKnown RBP11.04□□□□□ -0.64
LMX1B-204ENST00000561065 TXNDC17Q9BRA2 123 aa11.04□□□□□ -0.64
LMX1B-204ENST00000561065 ICOSQ9Y6W8 199 aa11.04□□□□□ -0.64
LMX1B-204ENST00000561065 TRAV34A0A0B4J273 112 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 TRBV6-1A0A0K0K1D8 114 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 PAGE4O60829 102 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 ORM1P02763 201 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 TYMSP04818 313 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 AKR1C3P42330 323 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 MRPL23Q16540 153 aaKnown RBP11.03□□□□□ -0.64
LMX1B-204ENST00000561065 ESRGQ1W209 222 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 C6orf223Q8N319 242 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
LMX1B-204ENST00000561065 A0A096LPF7 62 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 TRAV4A0A0B4J268 109 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 SH2D6Q7Z4S9 175 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 PTH2Q96A98 100 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 LINC00479Q96M42 142 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 MANBALQ9NQG1 85 aa11.02□□□□□ -0.65
LMX1B-204ENST00000561065 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
LMX1B-204ENST00000561065 MED14OSP0DP75 135 aa11.01□□□□□ -0.65
LMX1B-204ENST00000561065 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
LMX1B-204ENST00000561065 FAM162BQ5T6X4 162 aa11.01□□□□□ -0.65
LMX1B-204ENST00000561065 Q9H8V8 135 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms