RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 NXPH4O95158 308 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 STAG3L2P0CL84 134 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 STAG3L3P0CL85 134 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 OR2T35Q8NGX2 323 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 RAB24Q969Q5 203 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 C8orf49Q96NF6 230 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 DNAH2Q9P225 4427 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 DNAH17Q9UFH2 4485 aa9.71□□□□□ -0.86
TPM1-223ENST00000560445 KIAA1109Q2LD37 5005 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 TAAR5O14804 337 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 EIF3GO75821 320 aaKnown RBP eCLIP9.7□□□□□ -0.86
TPM1-223ENST00000560445 PPT1P50897 306 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 FHL2Q14192 279 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 SAPCD1Q5SSQ6 148 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 NKX6-2Q9C056 277 aaPredicted RBP9.7□□□□□ -0.86
TPM1-223ENST00000560445 SH3BGRL3Q9H299 93 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 MDFICQ9P1T7 246 aa9.7□□□□□ -0.86
TPM1-223ENST00000560445 TCRAP04437 139 aa9.69□□□□□ -0.86
TPM1-223ENST00000560445 EVI2AP22794 236 aa9.69□□□□□ -0.86
TPM1-223ENST00000560445 GCHFRP30047 84 aa9.69□□□□□ -0.86
TPM1-223ENST00000560445 Q5BKY6 102 aa9.69□□□□□ -0.86
TPM1-223ENST00000560445 C10orf126Q8N4M7 172 aa9.69□□□□□ -0.86
TPM1-223ENST00000560445 CYB561D1Q8N8Q1 229 aa9.69□□□□□ -0.86
TPM1-223ENST00000560445 LY96Q9Y6Y9 160 aa9.69□□□□□ -0.86
TPM1-223ENST00000560445 IGHV3-16A0A0C4DH30 117 aa9.68□□□□□ -0.86
TPM1-223ENST00000560445 F6UZH7 168 aa9.68□□□□□ -0.86
TPM1-223ENST00000560445 ERVFC1-1P60608 527 aa9.68□□□□□ -0.86
TPM1-223ENST00000560445 SMUG1Q53HV7 270 aa9.68□□□□□ -0.86
TPM1-223ENST00000560445 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
TPM1-223ENST00000560445 SUN5Q8TC36 379 aa9.68□□□□□ -0.86
TPM1-223ENST00000560445 A0A1W2PRE2 83 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 K7EQD1 137 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 PFN1P07737 140 aaKnown RBP9.67□□□□□ -0.86
TPM1-223ENST00000560445 GYPEP15421 78 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 LINC00315P59091 139 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 RPL7L1Q6DKI1 246 aaKnown RBP9.67□□□□□ -0.86
TPM1-223ENST00000560445 Q6ZQT7 251 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 SPATA12Q7Z6I5 190 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 TMEM75Q8N9X5 138 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 PRADC1Q9BSG0 188 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 KRTAP1-5Q9BYS1 174 aa9.67□□□□□ -0.86
TPM1-223ENST00000560445 TRAV8-1A0A0A6YYK1 113 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 TYMSP04818 313 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 TIRAPP58753 221 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 SUMO1P63165 101 aaKnown RBP9.66□□□□□ -0.86
TPM1-223ENST00000560445 GNG5P63218 68 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 FLI1Q01543 452 aaPredicted RBP9.66□□□□□ -0.86
TPM1-223ENST00000560445 AKR1C8PQ5T2L2 129 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 NHLRC2Q8NBF2 726 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 EPDR1Q9UM22 224 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
TPM1-223ENST00000560445 DNAH11Q96DT5 4516 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 CTXND1A0A1B0GTU2 59 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 GCGP01275 180 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 SFTA3P0C7M3 94 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 PTH2Q96A98 100 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 TCEAL7Q9BRU2 100 aa9.65□□□□□ -0.86
TPM1-223ENST00000560445 ARPC5O15511 151 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 GNRH2O43555 120 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 IFNA7P01567 189 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 RHOHQ15669 191 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 STOML3Q8TAV4 291 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 HIST1H2BAQ96A08 127 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 PKD1P98161 4303 aa9.64□□□□□ -0.87
TPM1-223ENST00000560445 TRAV8-6A0A0B4J262 113 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 TRBV6-4A0A1B0GX49 114 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 GGTLC3B5MD39 225 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 GATA1P15976 413 aaPredicted RBP9.63□□□□□ -0.87
TPM1-223ENST00000560445 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
TPM1-223ENST00000560445 PRNTQ86SH4 94 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 TVP23CQ96ET8 276 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 SGK494Q96LW2 274 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
TPM1-223ENST00000560445 LCE2BO14633 110 aa9.62□□□□□ -0.87
TPM1-223ENST00000560445 MGST1P10620 155 aaKnown RBP9.62□□□□□ -0.87
TPM1-223ENST00000560445 FABP5P3A8MUU1 101 aa9.61□□□□□ -0.87
TPM1-223ENST00000560445 A8MWV9 139 aa9.61□□□□□ -0.87
TPM1-223ENST00000560445 ASIPP42127 132 aa9.61□□□□□ -0.87
TPM1-223ENST00000560445 IGHV3-38A0A0C4DH36 116 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 PEX7O00628 323 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 RS1O15537 224 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 CRYGDP07320 174 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 SYT8Q8NBV8 401 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 ZFP30Q9Y2G7 519 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 ARL2-SNX15V9GYD0 113 aa9.6□□□□□ -0.87
TPM1-223ENST00000560445 RHODO00212 210 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 IGLV2-11P01706 119 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 UBE2G2P60604 165 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 UBE2G1P62253 170 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 ZNF345Q14585 488 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 211 ms