RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 C18orf65Q6ZTR6 163 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 ZNF738Q8NE65 137 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 PEF1Q9UBV8 284 aaKnown RBP10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 ZNF138P52744 262 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 RIPPLY3P57055 190 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 COX11Q9Y6N1 276 aa10.71□□□□□ -0.69
CARMIL3-203ENST00000560349 CRXO43186 299 aaPredicted RBP10.71□□□□□ -0.7
CARMIL3-203ENST00000560349 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 FOXE3Q13461 319 aa10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 PRSS57Q6UWY2 283 aa10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 CHCHD1Q96BP2 118 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 SERTM2A0A1B0GWG4 89 aa10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 OR4C46A6NHA9 309 aa10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 DUX3Q96PT4 197 aa10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 NDFIP1Q9BT67 221 aa10.7□□□□□ -0.7
CARMIL3-203ENST00000560349 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 SYS1-DBNDD2H3BUS1 97 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 DAZ1Q9NQZ3 744 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 C11orf21Q9P2W6 132 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 HAX1O00165 279 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 LEPROTL1O95214 131 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 CSN3P07498 182 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 KIR3DS1Q14943 382 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 TMEM78Q5T7P6 136 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 PRR9Q5T870 116 aa10.69□□□□□ -0.7
CARMIL3-203ENST00000560349 OTOGQ6ZRI0 2925 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 ANK3Q12955 4377 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 SPRY2O43597 315 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 SYNJ2BPP57105 145 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 hDV102S1A0JD36 115 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 KHDC1LQ5JSQ8 128 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 C11orf44Q8N8P7 122 aa10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 MCRIP2Q9BUT9 160 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-203ENST00000560349 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
CARMIL3-203ENST00000560349 A0A087WW49 117 aa10.67□□□□□ -0.7
CARMIL3-203ENST00000560349 C9orf139Q6ZV77 190 aa10.67□□□□□ -0.7
CARMIL3-203ENST00000560349 ATP6V0BQ99437 205 aa10.67□□□□□ -0.7
CARMIL3-203ENST00000560349 TIMM8BQ9Y5J9 83 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-203ENST00000560349 HIST1H1AQ02539 215 aaPredicted RBP10.66□□□□□ -0.7
CARMIL3-203ENST00000560349 AGRNO00468 2067 aa10.66□□□□□ -0.7
CARMIL3-203ENST00000560349 SOCS3O14543 225 aa10.66□□□□□ -0.7
CARMIL3-203ENST00000560349 BRI3O95415 125 aa10.66□□□□□ -0.7
CARMIL3-203ENST00000560349 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
CARMIL3-203ENST00000560349 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
CARMIL3-203ENST00000560349 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
CARMIL3-203ENST00000560349 ERASQ7Z444 233 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 SETXQ7Z333 2677 aaKnown RBP10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 IGKV3D-20A0A0C4DH25 116 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 SMKR1H3BMG3 65 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 RIGQ13278 110 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 TWIST1Q15672 202 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 ST20Q9HBF5 79 aa10.65□□□□□ -0.7
CARMIL3-203ENST00000560349 SMR3AQ99954 134 aa10.64□□□□□ -0.71
CARMIL3-203ENST00000560349 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 H0Y8G0 127 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 NCR2O95944 276 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 IGKV3-20P01619 116 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 OR5AL1P0C617 328 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 SLURP1P55000 103 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 VAMP3Q15836 100 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 HIVEP2P31629 2446 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 COX8CQ7Z4L0 72 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 MAP1LC3CQ9BXW4 147 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 ESM1Q9NQ30 184 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 JMJD1CQ15652 2540 aa10.63□□□□□ -0.71
CARMIL3-203ENST00000560349 K7ERU9 68 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 DNAJC9-AS1A6NH13 148 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 D6R8Y8 96 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 GAS8-AS1O95177 125 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 PET117Q6UWS5 81 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 OR10J6PQ8NGY7 276 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 YAE1D1Q9NRH1 226 aa10.62□□□□□ -0.71
CARMIL3-203ENST00000560349 LGALS1P09382 135 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 IGLC6P0CF74 106 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 KRTAP1-1Q07627 177 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 GATD1Q8NB37 220 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 FXYD7P58549 80 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 OR10AG1Q8NH19 301 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 SCRT2Q9NQ03 307 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 FBLL1A6NHQ2 334 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 SAP30O75446 220 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 SLC25A34Q6PIV7 304 aa10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 MRPL53Q96EL3 112 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-203ENST00000560349 MS4A6AQ9H2W1 248 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms