RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TRGV11A0A075B6L2 103 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 A0A096LPF7 62 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 FAM74A7A6NL05 159 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 HMSDA8MTL9 139 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 GCGP01275 180 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 SFTA3P0C7M3 94 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 FHL2Q14192 279 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 TMEM75Q8N9X5 138 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 ZNF479Q96JC4 524 aa8.06□□□□□ -1.12
RABGGTA-216ENST00000560243 NBDYA0A0U1RRE5 68 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 K7EQM0 130 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 PAX4O43316 350 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 IFNA7P01567 189 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 LINC00336Q6ZUF6 198 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 RASL10AQ92737 203 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 SPXQ9BT56 116 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 NDFIP1Q9BT67 221 aa8.05□□□□□ -1.12
RABGGTA-216ENST00000560243 A0A0D9SG52 128 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 PRSS29PA6NIE9 313 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 PEX7O00628 323 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 BCL2L11O43521 198 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 CRYBA4P53673 196 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 ZNF471Q9BX82 626 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 SDF2L1Q9HCN8 221 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 HHLA3Q9XRX5 114 aa8.04□□□□□ -1.12
RABGGTA-216ENST00000560243 A0A1B0GV50 99 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 KANTRA0A1W2PQU2 76 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 M0R2P5 195 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 PFN1P07737 140 aaKnown RBP8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 SEC11BP0C7V7 166 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 SMUG1Q53HV7 270 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 C1orf134Q5TEV5 83 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 TMUB2Q71RG4 321 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 Q86TA4 180 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 FAM213BQ8TBF2 198 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 KCNS1Q96KK3 526 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 Q9H8V8 135 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 ARL2-SNX15V9GYD0 113 aa8.03□□□□□ -1.12
RABGGTA-216ENST00000560243 TRGV4A0A0C4DH28 118 aa8.02□□□□□ -1.13
RABGGTA-216ENST00000560243 SAPCD1Q5SSQ6 148 aa8.02□□□□□ -1.13
RABGGTA-216ENST00000560243 CST9LP1Q5W188 147 aa8.02□□□□□ -1.13
RABGGTA-216ENST00000560243 SFT2D1Q8WV19 159 aa8.02□□□□□ -1.13
RABGGTA-216ENST00000560243 MRPS16Q9Y3D3 137 aaKnown RBP8.02□□□□□ -1.13
RABGGTA-216ENST00000560243 ICOSQ9Y6W8 199 aa8.02□□□□□ -1.13
RABGGTA-216ENST00000560243 KIAA1109Q2LD37 5005 aa8.02□□□□□ -1.13
RABGGTA-216ENST00000560243 DYNC1H1Q14204 4646 aaKnown RBP8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 TRAV4A0A0B4J268 109 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 IGKV3D-20A0A0C4DH25 116 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 FBLL1A6NHQ2 334 aaKnown RBP8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 C9JCJ5 164 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 PAGE4O60829 102 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 RNASE3P12724 160 aaKnown RBP8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 CRIP1P50238 77 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 PPT1P50897 306 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 ZFP69Q49AA0 526 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 DPPA3Q6W0C5 159 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 OR4C5Q8NGB2 326 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 STOML3Q8TAV4 291 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 MBD3L1Q8WWY6 194 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 HIST1H2BAQ96A08 127 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 ZC2HC1AQ96GY0 325 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 UPK3BQ9BT76 320 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 NKX6-2Q9C056 277 aaPredicted RBP8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 HERC2O95714 4834 aa8.01□□□□□ -1.13
RABGGTA-216ENST00000560243 LOC100131303A0A0U1RQF7 123 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 UMAD1C9J7I0 102 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 PFDN1O60925 122 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 SLAQ13239 276 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 LGALSLQ3ZCW2 172 aaPredicted RBP8□□□□□ -1.13
RABGGTA-216ENST00000560243 ZNF876PQ49A33 203 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 SOHLH1Q5JUK2 328 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 Q6ZNX1 250 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 C9orf85Q96MD7 179 aa8□□□□□ -1.13
RABGGTA-216ENST00000560243 PGPEP1LA6NFU8 196 aa7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 K7EQD1 137 aa7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 GYPEP15421 78 aa7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 TNP2Q05952 138 aa7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 MRPL23Q16540 153 aaKnown RBP7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 LYPD5Q6UWN5 251 aa7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 TCTE3Q8IZS6 198 aa7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 C6orf223Q8N319 242 aa7.99□□□□□ -1.13
RABGGTA-216ENST00000560243 IGHV3-73A0A0B4J1V6 119 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 FABP5P3A8MUU1 101 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 M0R036 132 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 SH2D1AO60880 128 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 NXPH4O95158 308 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 H2AFB1P0C5Y9 115 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 TPT1P13693 172 aaKnown RBP7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 CCL20P78556 96 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 ZNF506Q5JVG8 444 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 ZNF575Q86XF7 245 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 NHLRC2Q8NBF2 726 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
RABGGTA-216ENST00000560243 hCG_2014768A0A024R1R8 64 aa7.97□□□□□ -1.13
RABGGTA-216ENST00000560243 SCO2A0A1W2PP80 73 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms