RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PFDN5Q99471 154 aa13.07□□□□□ -0.32
RABGGTA-214ENST00000560163 ARPC5O15511 151 aa13.06□□□□□ -0.32
RABGGTA-214ENST00000560163 CAV2P51636 162 aa13.06□□□□□ -0.32
RABGGTA-214ENST00000560163 SCXQ7RTU7 201 aa13.06□□□□□ -0.32
RABGGTA-214ENST00000560163 C9orf62Q8N4C0 152 aa13.06□□□□□ -0.32
RABGGTA-214ENST00000560163 SPXQ9BT56 116 aa13.06□□□□□ -0.32
RABGGTA-214ENST00000560163 TIMM9Q9Y5J7 89 aa13.06□□□□□ -0.32
RABGGTA-214ENST00000560163 A0A0D9SG52 128 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 TRBV7-9A0A0J9YWB2 115 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 IGSF23A1L1A6 192 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 FAM24AA6NFZ4 105 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 PYYP10082 97 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 RPL29P47914 159 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 SULT1A1P50225 295 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 RAB31Q13636 194 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 STX12Q86Y82 276 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 KCNRGQ8N5I3 272 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 WDR83OSQ9Y284 106 aa13.05□□□□□ -0.32
RABGGTA-214ENST00000560163 TRAV4A0A0B4J268 109 aa13.04□□□□□ -0.32
RABGGTA-214ENST00000560163 LGALSLQ3ZCW2 172 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-214ENST00000560163 MUC21Q5SSG8 566 aa13.04□□□□□ -0.32
RABGGTA-214ENST00000560163 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
RABGGTA-214ENST00000560163 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
RABGGTA-214ENST00000560163 PKHD1L1Q86WI1 4243 aa13.04□□□□□ -0.32
RABGGTA-214ENST00000560163 ZNF138P52744 262 aa13.03□□□□□ -0.32
RABGGTA-214ENST00000560163 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
RABGGTA-214ENST00000560163 NKX2-5P52952 324 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 HBG1P69891 147 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 HBG2P69892 147 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 ZNF266Q14584 549 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 LAGE3Q14657 143 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 VWC2Q2TAL6 325 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 FAM122CQ6P4D5 195 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 Q8TAT8 98 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 AAMDCQ9H7C9 122 aa13.02□□□□□ -0.33
RABGGTA-214ENST00000560163 TRAV8-6A0A0B4J262 113 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 TAAR5O14804 337 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 IGHV3-30P01768 117 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 IGHV3-33P01772 117 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 IGHV3-30-3P0DP02 117 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 IGHV3-30-5P0DP03 117 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 S100A11P31949 105 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 PPT1P50897 306 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 NHLRC2Q8NBF2 726 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 OR4C5Q8NGB2 326 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 TM2D2Q9BX73 214 aa13.01□□□□□ -0.33
RABGGTA-214ENST00000560163 CST7O76096 145 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 NHLH2Q02577 135 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 TMEM183BQ1AE95 376 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 LINC01620Q4KN68 170 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 Q6AWC8 147 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 TMEM183AQ8IXX5 376 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 CHAC1Q9BUX1 264 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 UQCC1Q9NVA1 299 aa13□□□□□ -0.33
RABGGTA-214ENST00000560163 BCL2L11O43521 198 aa12.99□□□□□ -0.33
RABGGTA-214ENST00000560163 ATP6V1FQ16864 119 aa12.99□□□□□ -0.33
RABGGTA-214ENST00000560163 TDRG1Q3Y452 100 aa12.99□□□□□ -0.33
RABGGTA-214ENST00000560163 OR10J3Q5JRS4 329 aa12.99□□□□□ -0.33
RABGGTA-214ENST00000560163 OR5C1Q8NGR4 320 aa12.99□□□□□ -0.33
RABGGTA-214ENST00000560163 SLC25A2Q9BXI2 301 aa12.99□□□□□ -0.33
RABGGTA-214ENST00000560163 RNF213Q63HN8 5207 aa12.99□□□□□ -0.33
RABGGTA-214ENST00000560163 TRGV11A0A075B6L2 103 aa12.98□□□□□ -0.33
RABGGTA-214ENST00000560163 KANTRA0A1W2PQU2 76 aa12.98□□□□□ -0.33
RABGGTA-214ENST00000560163 LECT2O14960 151 aa12.98□□□□□ -0.33
RABGGTA-214ENST00000560163 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-214ENST00000560163 CIRBP-AS1Q8TBR5 109 aa12.98□□□□□ -0.33
RABGGTA-214ENST00000560163 FAM167A-AS1Q96KT0 104 aa12.98□□□□□ -0.33
RABGGTA-214ENST00000560163 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 IGHV3-16A0A0C4DH30 117 aa12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 M0R2P5 195 aa12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 NBEAP1P0C6P0 100 aa12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 GCSAMLQ5JQS6 135 aa12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 LELP1Q5T871 98 aa12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 FAM159AQ6UWV7 190 aa12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 ATP5SQ99766 215 aa12.97□□□□□ -0.33
RABGGTA-214ENST00000560163 RBAKDNA6NC62 111 aa12.96□□□□□ -0.33
RABGGTA-214ENST00000560163 Q8N3U1 123 aa12.96□□□□□ -0.33
RABGGTA-214ENST00000560163 SLC25A29Q8N8R3 303 aa12.96□□□□□ -0.33
RABGGTA-214ENST00000560163 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
RABGGTA-214ENST00000560163 GNRH2O43555 120 aa12.95□□□□□ -0.34
RABGGTA-214ENST00000560163 STOML3Q8TAV4 291 aa12.95□□□□□ -0.34
RABGGTA-214ENST00000560163 WFDC1Q9HC57 220 aa12.95□□□□□ -0.34
RABGGTA-214ENST00000560163 LRP2P98164 4655 aa12.95□□□□□ -0.34
RABGGTA-214ENST00000560163 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
RABGGTA-214ENST00000560163 EIF5AP63241 154 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-214ENST00000560163 SLC51BQ86UW2 128 aa12.94□□□□□ -0.34
RABGGTA-214ENST00000560163 FXYD5Q96DB9 178 aa12.94□□□□□ -0.34
RABGGTA-214ENST00000560163 SMIM3Q9BZL3 60 aa12.94□□□□□ -0.34
RABGGTA-214ENST00000560163 BORCS7-ASMTA0A0B4J1R7 106 aa12.93□□□□□ -0.34
RABGGTA-214ENST00000560163 MIR17HGQ75NE6 70 aa12.93□□□□□ -0.34
RABGGTA-214ENST00000560163 BAALCQ8WXS3 180 aa12.93□□□□□ -0.34
RABGGTA-214ENST00000560163 GTSF1LQ9H1H1 148 aa12.93□□□□□ -0.34
RABGGTA-214ENST00000560163 OR51M1Q9H341 326 aa12.93□□□□□ -0.34
RABGGTA-214ENST00000560163 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
RABGGTA-214ENST00000560163 TRAV8-3A0A0A6YYJ7 113 aa12.92□□□□□ -0.34
RABGGTA-214ENST00000560163 TRBV6-4A0A1B0GX49 114 aa12.92□□□□□ -0.34
RABGGTA-214ENST00000560163 IGLV2-8P01709 118 aa12.92□□□□□ -0.34
RABGGTA-214ENST00000560163 RPL7L1Q6DKI1 246 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms