RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 RNASE7Q9H1E1 156 aaKnown RBP14.95□□□□□ -0.02
PSEN1-225ENST00000560005 V9GYV3 84 aa14.95□□□□□ -0.02
PSEN1-225ENST00000560005 MUC4Q99102 2169 aa14.95□□□□□ -0.02
PSEN1-225ENST00000560005 KIR2DL5BA0A0G2JN68 375 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 KIR2DL5BA0A0G2JPC4 375 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 C19orf71A6NCJ1 209 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 COLCA2A8K830 154 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 A8MWL6 223 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 MED14OSP0DP75 135 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 NANOS2P60321 138 aaKnown RBP14.94□□□□□ -0.02
PSEN1-225ENST00000560005 ERCC8Q13216 396 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 ELOBQ15370 118 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 PSMG4Q5JS54 123 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 FAM162BQ5T6X4 162 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 KIR2DL5AQ8N109 375 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.94□□□□□ -0.02
PSEN1-225ENST00000560005 KIR2DL5BQ8NHK3 375 aa14.94□□□□□ -0.02
PSEN1-225ENST00000560005 TRBV24-1A0A075B6N3 115 aa14.93□□□□□ -0.02
PSEN1-225ENST00000560005 ZNF688P0C7X2 276 aa14.93□□□□□ -0.02
PSEN1-225ENST00000560005 RPL35AP18077 110 aaKnown RBP14.93□□□□□ -0.02
PSEN1-225ENST00000560005 HIST1H1AQ02539 215 aaPredicted RBP14.93□□□□□ -0.02
PSEN1-225ENST00000560005 FOXI2Q6ZQN5 318 aa14.93□□□□□ -0.02
PSEN1-225ENST00000560005 FAM24BQ8N5W8 94 aa14.93□□□□□ -0.02
PSEN1-225ENST00000560005 ZC2HC1AQ96GY0 325 aa14.93□□□□□ -0.02
PSEN1-225ENST00000560005 ODF3Q96PU9 254 aa14.93□□□□□ -0.02
PSEN1-225ENST00000560005 RPP21Q9H633 154 aaKnown RBP14.93□□□□□ -0.02
PSEN1-225ENST00000560005 XKRY2A2RUG3 117 aa14.92□□□□□ -0.02
PSEN1-225ENST00000560005 FAM231BA6NCW3 169 aa14.92□□□□□ -0.02
PSEN1-225ENST00000560005 FABP5P3A8MUU1 101 aa14.92□□□□□ -0.02
PSEN1-225ENST00000560005 YPEL4Q96NS1 127 aa14.92□□□□□ -0.02
PSEN1-225ENST00000560005 URGCP-MRPS24S4R325 110 aa14.92□□□□□ -0.02
PSEN1-225ENST00000560005 RPS20P60866 119 aaKnown RBP14.91□□□□□ -0.02
PSEN1-225ENST00000560005 C11orf45Q8TAV5 145 aa14.91□□□□□ -0.02
PSEN1-225ENST00000560005 C8orf49Q96NF6 230 aa14.91□□□□□ -0.02
PSEN1-225ENST00000560005 PYGO2Q9BRQ0 406 aa14.91□□□□□ -0.02
PSEN1-225ENST00000560005 GFRA4Q9GZZ7 299 aa14.91□□□□□ -0.02
PSEN1-225ENST00000560005 PKD1P98161 4303 aa14.91□□□□□ -0.02
PSEN1-225ENST00000560005 A0A0J9YX75 114 aa14.9□□□□□ -0.02
PSEN1-225ENST00000560005 TSPOP30536 169 aa14.9□□□□□ -0.02
PSEN1-225ENST00000560005 ODF3L2Q3SX64 289 aa14.9□□□□□ -0.02
PSEN1-225ENST00000560005 Q8TAT8 98 aa14.9□□□□□ -0.02
PSEN1-225ENST00000560005 TSKUQ8WUA8 353 aa14.9□□□□□ -0.02
PSEN1-225ENST00000560005 SAV1Q9H4B6 383 aaPredicted RBP14.9□□□□□ -0.02
PSEN1-225ENST00000560005 A0A1B0GVY2 172 aa14.89□□□□□ -0.03
PSEN1-225ENST00000560005 SMIM27A0A1W2PRY6 76 aa14.89□□□□□ -0.03
PSEN1-225ENST00000560005 LEPP41159 167 aa14.89□□□□□ -0.03
PSEN1-225ENST00000560005 COX19Q49B96 90 aa14.89□□□□□ -0.03
PSEN1-225ENST00000560005 LINC00336Q6ZUF6 198 aa14.89□□□□□ -0.03
PSEN1-225ENST00000560005 FAM210BQ96KR6 192 aa14.89□□□□□ -0.03
PSEN1-225ENST00000560005 MAP6D1Q9H9H5 199 aa14.89□□□□□ -0.03
PSEN1-225ENST00000560005 CRISP2P16562 243 aa14.88□□□□□ -0.03
PSEN1-225ENST00000560005 RAB5AP20339 215 aa14.88□□□□□ -0.03
PSEN1-225ENST00000560005 OR2D3Q8NGH3 330 aa14.88□□□□□ -0.03
PSEN1-225ENST00000560005 NAT8BQ9UHF3 227 aa14.88□□□□□ -0.03
PSEN1-225ENST00000560005 A0A1W2PPQ1 181 aa14.87□□□□□ -0.03
PSEN1-225ENST00000560005 TMEM189A5PLL7 270 aa14.87□□□□□ -0.03
PSEN1-225ENST00000560005 TCTAP57738 103 aa14.87□□□□□ -0.03
PSEN1-225ENST00000560005 FAM19A4Q96LR4 140 aa14.87□□□□□ -0.03
PSEN1-225ENST00000560005 SH2D1AO60880 128 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 TYMSP04818 313 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 GPX1P07203 203 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 CRIP1P50238 77 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 FAM3BP58499 235 aaPredicted RBP14.86□□□□□ -0.03
PSEN1-225ENST00000560005 DEFB131AP59861 70 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 Q6AWC8 147 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 APRG1Q8IVJ8 170 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 APLNQ9ULZ1 77 aa14.86□□□□□ -0.03
PSEN1-225ENST00000560005 TGIF2-C20orf24A0A0A6YYL0 155 aa14.85□□□□□ -0.03
PSEN1-225ENST00000560005 TRAV21A0A0B4J279 112 aa14.85□□□□□ -0.03
PSEN1-225ENST00000560005 F6UB75 175 aa14.85□□□□□ -0.03
PSEN1-225ENST00000560005 ZNF705DP0CH99 300 aaPredicted RBP14.85□□□□□ -0.03
PSEN1-225ENST00000560005 ZNF705BP0CI00 300 aaPredicted RBP14.85□□□□□ -0.03
PSEN1-225ENST00000560005 PRB4P10163 310 aaPredicted RBP14.85□□□□□ -0.03
PSEN1-225ENST00000560005 CLUHP3Q96NS8 147 aa14.85□□□□□ -0.03
PSEN1-225ENST00000560005 C11orf68Q9H3H3 251 aaKnown RBP14.85□□□□□ -0.03
PSEN1-225ENST00000560005 IGLL5B9A064 214 aa14.84□□□□□ -0.03
PSEN1-225ENST00000560005 HLA-DRB4P13762 266 aa14.84□□□□□ -0.03
PSEN1-225ENST00000560005 FOXA3P55318 350 aaPredicted RBP14.84□□□□□ -0.03
PSEN1-225ENST00000560005 HLA-DRB4X5D2U9 266 aa14.84□□□□□ -0.03
PSEN1-225ENST00000560005 AGRNO00468 2067 aa14.83□□□□□ -0.03
PSEN1-225ENST00000560005 ORM1P02763 201 aa14.83□□□□□ -0.04
PSEN1-225ENST00000560005 CXCL1P09341 107 aa14.83□□□□□ -0.04
PSEN1-225ENST00000560005 RPS10P46783 165 aaKnown RBP14.83□□□□□ -0.04
PSEN1-225ENST00000560005 RASL11AQ6T310 242 aa14.83□□□□□ -0.04
PSEN1-225ENST00000560005 ZFAND2AQ8N6M9 145 aa14.83□□□□□ -0.04
PSEN1-225ENST00000560005 KRTAP4-5Q9BYR2 181 aa14.83□□□□□ -0.04
PSEN1-225ENST00000560005 CSTL1Q9H114 145 aa14.83□□□□□ -0.04
PSEN1-225ENST00000560005 A8MTW9 85 aa14.82□□□□□ -0.04
PSEN1-225ENST00000560005 DEFB4AO15263 64 aa14.82□□□□□ -0.04
PSEN1-225ENST00000560005 ZNF80P51504 273 aaPredicted RBP14.82□□□□□ -0.04
PSEN1-225ENST00000560005 LINC01559Q495D7 138 aa14.82□□□□□ -0.04
PSEN1-225ENST00000560005 ATP5L2Q7Z4Y8 100 aa14.82□□□□□ -0.04
PSEN1-225ENST00000560005 OR11H2Q8NH07 326 aa14.82□□□□□ -0.04
PSEN1-225ENST00000560005 HSPG2P98160 4391 aa14.82□□□□□ -0.04
PSEN1-225ENST00000560005 HIGD1CA8MV81 97 aa14.81□□□□□ -0.04
PSEN1-225ENST00000560005 C1orf196B1AJZ1 125 aa14.81□□□□□ -0.04
PSEN1-225ENST00000560005 KLLNB2CW77 178 aa14.81□□□□□ -0.04
PSEN1-225ENST00000560005 CDKN1BP46527 198 aa14.81□□□□□ -0.04
PSEN1-225ENST00000560005 ZNF124Q15973 351 aa14.81□□□□□ -0.04
PSEN1-225ENST00000560005 WDR73Q6P4I2 378 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms