RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 TAAR5O14804 337 aa8.62□□□□□ -1.03
SNX1-209ENST00000559961 CIDEAO60543 219 aa8.62□□□□□ -1.03
SNX1-209ENST00000559961 PPT1P50897 306 aa8.62□□□□□ -1.03
SNX1-209ENST00000559961 RAB2AP61019 212 aa8.62□□□□□ -1.03
SNX1-209ENST00000559961 INO80EQ8NBZ0 244 aaPredicted RBP8.62□□□□□ -1.03
SNX1-209ENST00000559961 MED28Q9H204 178 aa8.62□□□□□ -1.03
SNX1-209ENST00000559961 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
SNX1-209ENST00000559961 TRAV8-6A0A0B4J262 113 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 FBLL1A6NHQ2 334 aaKnown RBP8.61□□□□□ -1.03
SNX1-209ENST00000559961 HMGB3O15347 200 aaKnown RBP8.61□□□□□ -1.03
SNX1-209ENST00000559961 GNRH2O43555 120 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 PSCAO43653 123 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 PFN1P07737 140 aaKnown RBP8.61□□□□□ -1.03
SNX1-209ENST00000559961 SERF2P84101 59 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 C5orf17Q8NAS9 161 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 HSD17B11Q8NBQ5 300 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 PRADC1Q9BSG0 188 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 ACTR3CQ9C0K3 210 aaPredicted RBP8.61□□□□□ -1.03
SNX1-209ENST00000559961 WFDC1Q9HC57 220 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 BATF3Q9NR55 127 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 TMEM167BQ9NRX6 74 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
SNX1-209ENST00000559961 PKHD1P08F94 4074 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 BORCS7-ASMTA0A0B4J1R7 106 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 IGHV3-16A0A0C4DH30 117 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 F6UZH7 168 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 CXorf1O96002 111 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 CRYGDP07320 174 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 ARL14EPLP0DKL9 152 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 ZNF876PQ49A33 203 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 SCRT2Q9NQ03 307 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 ALG5Q9Y673 324 aa8.6□□□□□ -1.03
SNX1-209ENST00000559961 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
SNX1-209ENST00000559961 EIF3GO75821 320 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNX1-209ENST00000559961 TYMSP04818 313 aa8.59□□□□□ -1.03
SNX1-209ENST00000559961 KRTAP10-2P60368 255 aa8.59□□□□□ -1.03
SNX1-209ENST00000559961 SMUG1Q53HV7 270 aa8.59□□□□□ -1.03
SNX1-209ENST00000559961 SAPCD1Q5SSQ6 148 aa8.59□□□□□ -1.03
SNX1-209ENST00000559961 Q8N1X5 172 aa8.59□□□□□ -1.03
SNX1-209ENST00000559961 OR2G3Q8NGZ4 309 aa8.59□□□□□ -1.03
SNX1-209ENST00000559961 RAB24Q969Q5 203 aa8.59□□□□□ -1.03
SNX1-209ENST00000559961 PSMG3Q9BT73 122 aaPredicted RBP8.59□□□□□ -1.03
SNX1-209ENST00000559961 PKD1P98161 4303 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 TRAV8-1A0A0A6YYK1 113 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 GCGP01275 180 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 IFNA7P01567 189 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 TCRAP04437 139 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
SNX1-209ENST00000559961 GCHFRP30047 84 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 SUMO1P63165 101 aaKnown RBP8.58□□□□□ -1.04
SNX1-209ENST00000559961 GNG5P63218 68 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 PRNTQ86SH4 94 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 SGK494Q96LW2 274 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 TNFSF18Q9UNG2 199 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 PSG8Q9UQ74 426 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 PCLOQ9Y6V0 5065 aa8.58□□□□□ -1.04
SNX1-209ENST00000559961 PTTG1O95997 202 aa8.57□□□□□ -1.04
SNX1-209ENST00000559961 FLI1Q01543 452 aaPredicted RBP8.57□□□□□ -1.04
SNX1-209ENST00000559961 RHOHQ15669 191 aa8.57□□□□□ -1.04
SNX1-209ENST00000559961 CYB561D1Q8N8Q1 229 aa8.57□□□□□ -1.04
SNX1-209ENST00000559961 AQP10Q96PS8 301 aa8.57□□□□□ -1.04
SNX1-209ENST00000559961 EPDR1Q9UM22 224 aa8.57□□□□□ -1.04
SNX1-209ENST00000559961 IGHV3-38A0A0C4DH36 116 aa8.56□□□□□ -1.04
SNX1-209ENST00000559961 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
SNX1-209ENST00000559961 GATA1P15976 413 aaPredicted RBP8.56□□□□□ -1.04
SNX1-209ENST00000559961 ATP6V0CP27449 155 aa8.56□□□□□ -1.04
SNX1-209ENST00000559961 TIRAPP58753 221 aa8.56□□□□□ -1.04
SNX1-209ENST00000559961 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
SNX1-209ENST00000559961 NKX6-2Q9C056 277 aaPredicted RBP8.56□□□□□ -1.04
SNX1-209ENST00000559961 MUC4Q99102 2169 aa8.56□□□□□ -1.04
SNX1-209ENST00000559961 TRBV6-4A0A1B0GX49 114 aa8.55□□□□□ -1.04
SNX1-209ENST00000559961 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
SNX1-209ENST00000559961 TMEM75Q8N9X5 138 aa8.55□□□□□ -1.04
SNX1-209ENST00000559961 TNFRSF18Q9Y5U5 241 aa8.55□□□□□ -1.04
SNX1-209ENST00000559961 A0A087WTM6 91 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 FXYD6-FXYD2A0A087WZ82 144 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 A0A1W2PRE2 83 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 EPM2AB3EWF7 344 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 RS1O15537 224 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 GIPP09681 153 aaPredicted RBP8.54□□□□□ -1.04
SNX1-209ENST00000559961 MGST1P10620 155 aaKnown RBP8.54□□□□□ -1.04
SNX1-209ENST00000559961 LGALSLQ3ZCW2 172 aaPredicted RBP8.54□□□□□ -1.04
SNX1-209ENST00000559961 AKR1C8PQ5T2L2 129 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 SLC25A29Q8N8R3 303 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 TVP23CQ96ET8 276 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 RYR1P21817 5038 aa8.54□□□□□ -1.04
SNX1-209ENST00000559961 IGHV3-73A0A0B4J1V6 119 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 FABP5P3A8MUU1 101 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 A8MWV9 139 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 ASIPP42127 132 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 SYT8Q8NBV8 401 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 STOML3Q8TAV4 291 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
SNX1-209ENST00000559961 FRZBQ92765 325 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms