RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 C10orf126Q8N4M7 172 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 OR2G3Q8NGZ4 309 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 WFDC1Q9HC57 220 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 LRP1BQ9NZR2 4599 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 IGHV3-16A0A0C4DH30 117 aa8.36□□□□□ -1.07
SPG11-219ENST00000559822 EIF3GO75821 320 aaKnown RBP eCLIP8.36□□□□□ -1.07
SPG11-219ENST00000559822 MBP02144 154 aa8.36□□□□□ -1.07
SPG11-219ENST00000559822 ARL14EPLP0DKL9 152 aa8.36□□□□□ -1.07
SPG11-219ENST00000559822 C5orf17Q8NAS9 161 aa8.36□□□□□ -1.07
SPG11-219ENST00000559822 ASB13Q8WXK3 278 aa8.36□□□□□ -1.07
SPG11-219ENST00000559822 PSMG3Q9BT73 122 aaPredicted RBP8.36□□□□□ -1.07
SPG11-219ENST00000559822 BOLA1Q9Y3E2 137 aa8.36□□□□□ -1.07
SPG11-219ENST00000559822 RYR1P21817 5038 aa8.36□□□□□ -1.07
SPG11-219ENST00000559822 HSPG2P98160 4391 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 TRAV8-1A0A0A6YYK1 113 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 FBLL1A6NHQ2 334 aaKnown RBP8.35□□□□□ -1.07
SPG11-219ENST00000559822 F6UZH7 168 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 HMGB3O15347 200 aaKnown RBP8.35□□□□□ -1.07
SPG11-219ENST00000559822 GNRH2O43555 120 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 CIDEAO60543 219 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 TYMSP04818 313 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 STAG3L2P0CL84 134 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 STAG3L3P0CL85 134 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 SERF2P84101 59 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 ZFP69Q49AA0 526 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 SCRT2Q9NQ03 307 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 MSRB1Q9NZV6 116 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 ALG5Q9Y673 324 aa8.35□□□□□ -1.07
SPG11-219ENST00000559822 TIRAPP58753 221 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 GNG5P63218 68 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 WFDC10BQ8IUB3 73 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 NHLRC2Q8NBF2 726 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 HSD17B11Q8NBQ5 300 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 RAB24Q969Q5 203 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 TVP23CQ96ET8 276 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 TMEM167BQ9NRX6 74 aa8.34□□□□□ -1.07
SPG11-219ENST00000559822 TAAR5O14804 337 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 PTTG1O95997 202 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 TCRAP04437 139 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 CRYGDP07320 174 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
SPG11-219ENST00000559822 GATA1P15976 413 aaPredicted RBP8.33□□□□□ -1.08
SPG11-219ENST00000559822 GCHFRP30047 84 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 PPT1P50897 306 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 ZNF876PQ49A33 203 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 AQP10Q96PS8 301 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 ACTR3CQ9C0K3 210 aaPredicted RBP8.33□□□□□ -1.08
SPG11-219ENST00000559822 MED28Q9H204 178 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
SPG11-219ENST00000559822 A0A087WTM6 91 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 CXorf1O96002 111 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 ATP6V0CP27449 155 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 FLI1Q01543 452 aaPredicted RBP8.32□□□□□ -1.08
SPG11-219ENST00000559822 RHOHQ15669 191 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 SMUG1Q53HV7 270 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 CYB561D1Q8N8Q1 229 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 SUN5Q8TC36 379 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 PRADC1Q9BSG0 188 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 TNFSF18Q9UNG2 199 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 PSG8Q9UQ74 426 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
SPG11-219ENST00000559822 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 IGHV3-38A0A0C4DH36 116 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 TRBV6-4A0A1B0GX49 114 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 GCGP01275 180 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 SUMO1P63165 101 aaKnown RBP8.31□□□□□ -1.08
SPG11-219ENST00000559822 SAPCD1Q5SSQ6 148 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 TMEM75Q8N9X5 138 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 INO80EQ8NBZ0 244 aaPredicted RBP8.31□□□□□ -1.08
SPG11-219ENST00000559822 SGK494Q96LW2 274 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 DNAH5Q8TE73 4624 aa8.31□□□□□ -1.08
SPG11-219ENST00000559822 RS1O15537 224 aa8.3□□□□□ -1.08
SPG11-219ENST00000559822 PSCAO43653 123 aa8.3□□□□□ -1.08
SPG11-219ENST00000559822 CFAP126Q5VTH2 177 aa8.3□□□□□ -1.08
SPG11-219ENST00000559822 PRNTQ86SH4 94 aa8.3□□□□□ -1.08
SPG11-219ENST00000559822 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
SPG11-219ENST00000559822 PTH2Q96A98 100 aa8.3□□□□□ -1.08
SPG11-219ENST00000559822 SH3BGRL3Q9H299 93 aa8.3□□□□□ -1.08
SPG11-219ENST00000559822 BORCS7-ASMTA0A0B4J1R7 106 aa8.29□□□□□ -1.08
SPG11-219ENST00000559822 LOC100131303A0A0U1RQF7 123 aa8.29□□□□□ -1.08
SPG11-219ENST00000559822 A0A1W2PRE2 83 aa8.29□□□□□ -1.08
SPG11-219ENST00000559822 GGTLC3B5MD39 225 aa8.29□□□□□ -1.08
SPG11-219ENST00000559822 GIPP09681 153 aaPredicted RBP8.29□□□□□ -1.08
SPG11-219ENST00000559822 MGST1P10620 155 aaKnown RBP8.29□□□□□ -1.08
SPG11-219ENST00000559822 LINC01556Q5JQF7 62 aa8.29□□□□□ -1.08
SPG11-219ENST00000559822 OR10J3Q5JRS4 329 aa8.29□□□□□ -1.08
SPG11-219ENST00000559822 C9orf85Q96MD7 179 aa8.29□□□□□ -1.08
SPG11-219ENST00000559822 APOBP04114 4563 aaKnown RBP8.29□□□□□ -1.08
SPG11-219ENST00000559822 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
SPG11-219ENST00000559822 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
SPG11-219ENST00000559822 S100A4P26447 101 aaKnown RBP8.28□□□□□ -1.08
SPG11-219ENST00000559822 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
SPG11-219ENST00000559822 ZNF506Q5JVG8 444 aa8.28□□□□□ -1.08
SPG11-219ENST00000559822 NKX6-2Q9C056 277 aaPredicted RBP8.28□□□□□ -1.08
SPG11-219ENST00000559822 C11orf21Q9P2W6 132 aa8.28□□□□□ -1.08
SPG11-219ENST00000559822 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
SPG11-219ENST00000559822 CTXND1A0A1B0GTU2 59 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms