RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 NCOR1O75376 2440 aa-0.55□□□□□ -2.5
CASC4-210ENST00000559550 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.55□□□□□ -2.5
CASC4-210ENST00000559550 FAM135BQ49AJ0 1406 aa-0.55□□□□□ -2.5
CASC4-210ENST00000559550 ZANQ9Y493 2812 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 EIF3AQ14152 1382 aaKnown RBP-0.56□□□□□ -2.5
CASC4-210ENST00000559550 ANKRD31Q8N7Z5 1873 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 IFITM5A6NNB3 132 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 ETV6P41212 452 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 BLCAPP62952 87 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 RHOHQ15669 191 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 FAM213BQ8TBF2 198 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 ATG5Q9H1Y0 275 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 STOML2Q9UJZ1 356 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.56□□□□□ -2.5
CASC4-210ENST00000559550 CDK12Q9NYV4 1490 aaPredicted RBP-0.56□□□□□ -2.5
CASC4-210ENST00000559550 MYH3P11055 1940 aa-0.56□□□□□ -2.5
CASC4-210ENST00000559550 BLMP54132 1417 aaPredicted RBP-0.56□□□□□ -2.5
CASC4-210ENST00000559550 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.57□□□□□ -2.5
CASC4-210ENST00000559550 TRAV13-1A0A0B4J241 112 aa-0.57□□□□□ -2.5
CASC4-210ENST00000559550 CCKP06307 115 aa-0.57□□□□□ -2.5
CASC4-210ENST00000559550 DCUN1D2Q6PH85 259 aa-0.57□□□□□ -2.5
CASC4-210ENST00000559550 OR51A4Q8NGJ6 313 aa-0.57□□□□□ -2.5
CASC4-210ENST00000559550 DOPEY1Q5JWR5 2465 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 RREB1Q92766 1687 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 MED13LQ71F56 2210 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 H3BMG7 143 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 HRCT1Q6UXD1 115 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 OR5A2Q8NGI9 324 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 SMIM7Q9BQ49 75 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 HSPG2P98160 4391 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 F5P12259 2224 aa-0.58□□□□□ -2.5
CASC4-210ENST00000559550 MAP1LC3B2A6NCE7 125 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 CRYGSP22914 178 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 SERPINB1P30740 379 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 CRYBA4P53673 196 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 MRPS15P82914 257 aaKnown RBP-0.59□□□□□ -2.5
CASC4-210ENST00000559550 IDO2Q6ZQW0 420 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 DSCR8Q96T75 97 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 PRR15LQ9BU68 103 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 LAMTOR2Q9Y2Q5 125 aa-0.59□□□□□ -2.5
CASC4-210ENST00000559550 YTHDC2Q9H6S0 1430 aaKnown RBP-0.59□□□□□ -2.5
CASC4-210ENST00000559550 NUP210Q8TEM1 1887 aaPredicted RBP-0.6□□□□□ -2.51
CASC4-210ENST00000559550 SOGA1O94964 1423 aa-0.6□□□□□ -2.51
CASC4-210ENST00000559550 TMEM238C9JI98 176 aa-0.6□□□□□ -2.51
CASC4-210ENST00000559550 COX6A2Q02221 97 aa-0.6□□□□□ -2.51
CASC4-210ENST00000559550 C3orf33Q6P1S2 294 aa-0.6□□□□□ -2.51
CASC4-210ENST00000559550 BOLA2Q9H3K6 86 aa-0.6□□□□□ -2.51
CASC4-210ENST00000559550 DLEC1Q9Y238 1755 aa-0.6□□□□□ -2.51
CASC4-210ENST00000559550 USH2AO75445 5202 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 MAP2P11137 1827 aaKnown RBP-0.61□□□□□ -2.51
CASC4-210ENST00000559550 RYR1P21817 5038 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 TRBV7-6A0A0J9YX20 115 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 C9JAW5 83 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 M0QZK8 103 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 TMEM78Q5T7P6 136 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 STX12Q86Y82 276 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 LXNQ9BS40 222 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 CBLN4Q9NTU7 201 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 GID8Q9NWU2 228 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 HYDINQ4G0P3 5121 aa-0.61□□□□□ -2.51
CASC4-210ENST00000559550 LRP1BQ9NZR2 4599 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 KIAA1109Q2LD37 5005 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 PTPN13Q12923 2485 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 NF1P21359 2839 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 LOC107984640A0A0U1RRK4 108 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 PPP5D1E7EU14 171 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 SRP9P49458 86 aaKnown RBP-0.62□□□□□ -2.51
CASC4-210ENST00000559550 EMX2Q04743 252 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 OTOSQ8NHW6 89 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 MED31Q9Y3C7 131 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 TENM2Q9NT68 2774 aa-0.62□□□□□ -2.51
CASC4-210ENST00000559550 FLNAP21333 2647 aaKnown RBP-0.62□□□□□ -2.51
CASC4-210ENST00000559550 MYCBP2O75592 4640 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 STARD9Q9P2P6 4700 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 PTPRGP23470 1445 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 LRP5O75197 1615 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 IGHV1-24A0A0C4DH33 117 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 TRBV10-1A0A0K0K1A3 114 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 A0A1W2PRE2 83 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 F2Z2F3 143 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 HBDP02042 147 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 TFF1P04155 84 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 CKS2P33552 79 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 KRTAP19-8Q3LI54 63 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 UNQ5815/PRO19632Q6UWF5 114 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 CCDC32Q9BV29 185 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 TRAPPC2LQ9UL33 140 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 UNC13BO14795 1591 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 SYNMO15061 1565 aa-0.63□□□□□ -2.51
CASC4-210ENST00000559550 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.63□□□□□ -2.51
CASC4-210ENST00000559550 KMT2AQ03164 3969 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 MCRIP1C9JLW8 97 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 PYYP10082 97 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 ADCYAP1P18509 176 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 ELOF1P60002 83 aaKnown RBP-0.64□□□□□ -2.51
CASC4-210ENST00000559550 BRK1Q8WUW1 75 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 NAT14Q8WUY8 206 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 TMEM141Q96I45 108 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 CREBBPQ92793 2442 aa-0.64□□□□□ -2.51
CASC4-210ENST00000559550 LAMA5O15230 3695 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms