RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 LINC00612Q8N6U2 182 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 TMEM75Q8N9X5 138 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 SGK494Q96LW2 274 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 SPXQ9BT56 116 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 MAP1LC3BQ9GZQ8 125 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 TMPRSS5Q9H3S3 457 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 CYTL1Q9NRR1 136 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 TP53TG3Q9ULZ0 132 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 PSG8Q9UQ74 426 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 KLF12Q9Y4X4 402 aa3.08□□□□□ -1.92
SNX1-205ENST00000559339 TRGV4A0A0C4DH28 118 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 A0A0J9YY99 117 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 FAM74A7A6NL05 159 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 FABP5P3A8MUU1 101 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 M0R2P5 195 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 PEX7O00628 323 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 PAX4O43316 350 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 GCGP01275 180 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 S100A4P26447 101 aaKnown RBP3.07□□□□□ -1.92
SNX1-205ENST00000559339 FHITP49789 147 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 ZNF726P1Q15940 193 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 TMUB2Q71RG4 321 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 AKAP14Q86UN6 197 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 TCTE3Q8IZS6 198 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 OR11H4Q8NGC9 324 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 FAM213BQ8TBF2 198 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 PCNPQ8WW12 178 aaKnown RBP3.07□□□□□ -1.92
SNX1-205ENST00000559339 RASL10AQ92737 203 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 FMC1Q96HJ9 113 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 MRPL16Q9NX20 251 aaKnown RBP3.07□□□□□ -1.92
SNX1-205ENST00000559339 MDFICQ9P1T7 246 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 PRO0255Q9UI72 69 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 HHLA3Q9XRX5 114 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 ZFP30Q9Y2G7 519 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 ARL2-SNX15V9GYD0 113 aa3.07□□□□□ -1.92
SNX1-205ENST00000559339 IGLV2-18A0A075B6J9 118 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 IGHV3-16A0A0C4DH30 117 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 C9JCJ5 164 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 M0R2N4 97 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 GNRH2O43555 120 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 CIDEAO60543 219 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 PAGE4O60829 102 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 IGLV2-11P01706 119 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 IGHV3-53P01767 116 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 C1QBP02746 253 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 ORM1P02763 201 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 S100A9P06702 114 aaKnown RBP3.06□□□□□ -1.92
SNX1-205ENST00000559339 HOXA5P20719 270 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 MRPL23Q16540 153 aaKnown RBP3.06□□□□□ -1.92
SNX1-205ENST00000559339 ZNF876PQ49A33 203 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 FAM162BQ5T6X4 162 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 Q6ZQT7 251 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 LINC00336Q6ZUF6 198 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 SLC51BQ86UW2 128 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 OR4C5Q8NGB2 326 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 MBD3L1Q8WWY6 194 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 TVP23CQ96ET8 276 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 LINC00479Q96M42 142 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 C8orf49Q96NF6 230 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 TXNDC17Q9BRA2 123 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 ICOSQ9Y6W8 199 aa3.06□□□□□ -1.92
SNX1-205ENST00000559339 LYSTQ99698 3801 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 STARD9Q9P2P6 4700 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 hCG_2014768A0A024R1R8 64 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 A0A096LPF7 62 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 TRAV4A0A0B4J268 109 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 TRAV34A0A0B4J273 112 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 A0A1B0GV50 99 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 B4DEV8 164 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 IFNA1P01562 189 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 TYMSP04818 313 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 SRIP30626 198 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 TAGLN2P37802 199 aaKnown RBP3.05□□□□□ -1.92
SNX1-205ENST00000559339 ASIPP42127 132 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 AKR1C3P42330 323 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 CRYBA4P53673 196 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 TTC32Q5I0X7 151 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 C1orf134Q5TEV5 83 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 CDPF1Q6NVV7 123 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 Q6ZNX1 250 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 NEGR1Q7Z3B1 354 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 SH2D6Q7Z4S9 175 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 Q86TA4 180 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 SYT8Q8NBV8 401 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 PRADC1Q9BSG0 188 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 Q9H8V8 135 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 MANBALQ9NQG1 85 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 GNG13Q9P2W3 67 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 LINC00588Q9Y4M8 146 aa3.05□□□□□ -1.92
SNX1-205ENST00000559339 TRAV9-2A0A087WT02 112 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 TRAV1-1A0A0B4J248 108 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 TRBV6-1A0A0K0K1D8 114 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 NBDYA0A0U1RRE5 68 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 A0A1W2PPQ1 181 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 A8MWV9 139 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 K7EP13 123 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 PDE6DO43924 150 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 LTAP01374 205 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 SFTA3P0C7M3 94 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 MGST1P10620 155 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms