RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 FAM106AQ4KMX7 169 aa11.94□□□□□ -0.5
CDC42BPB-204ENST00000559043 ZNF493Q6ZR52 646 aa11.94□□□□□ -0.5
CDC42BPB-204ENST00000559043 TMEM213A2RRL7 107 aa11.94□□□□□ -0.5
CDC42BPB-204ENST00000559043 BMI1P35226 326 aa11.94□□□□□ -0.5
CDC42BPB-204ENST00000559043 Q8TAT8 98 aa11.94□□□□□ -0.5
CDC42BPB-204ENST00000559043 SELENOKQ9Y6D0 94 aa11.94□□□□□ -0.5
CDC42BPB-204ENST00000559043 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
CDC42BPB-204ENST00000559043 IGHV3-49A0A0A0MS15 119 aa11.93□□□□□ -0.5
CDC42BPB-204ENST00000559043 LGALS9O00182 355 aa11.93□□□□□ -0.5
CDC42BPB-204ENST00000559043 ZNF80P51504 273 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPB-204ENST00000559043 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
CDC42BPB-204ENST00000559043 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 PF4P02776 101 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 RPS20P60866 119 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 C2orf70A6NJV1 201 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 PRAC2D3DTV9 90 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 OVOL1O14753 267 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 LINC00614P0C842 121 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 CTRLP40313 264 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 EBLN2Q6P2I7 272 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 LYZL1Q6UWQ5 148 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 OR9G4Q8NGQ1 327 aa11.92□□□□□ -0.5
CDC42BPB-204ENST00000559043 CMYA5Q8N3K9 4069 aa11.91□□□□□ -0.5
CDC42BPB-204ENST00000559043 TRAV8-2A0A0B4J237 113 aa11.91□□□□□ -0.5
CDC42BPB-204ENST00000559043 M0QZ24 198 aa11.91□□□□□ -0.5
CDC42BPB-204ENST00000559043 CSN3P07498 182 aa11.91□□□□□ -0.5
CDC42BPB-204ENST00000559043 RAB4AP20338 218 aa11.91□□□□□ -0.5
CDC42BPB-204ENST00000559043 MIEN1Q9BRT3 115 aa11.91□□□□□ -0.5
CDC42BPB-204ENST00000559043 K7EMT4 169 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 RNF182Q8N6D2 247 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 TPPP3Q9BW30 176 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 DAZ1Q9NQZ3 744 aaKnown RBP11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 DNHD1Q96M86 4753 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 IGLC6P0CF74 106 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 ERCC8Q13216 396 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
CDC42BPB-204ENST00000559043 TMSB15BA0A087X1C1 80 aa11.89□□□□□ -0.51
CDC42BPB-204ENST00000559043 GLMPQ8WWB7 406 aa11.89□□□□□ -0.51
CDC42BPB-204ENST00000559043 UFC1Q9Y3C8 167 aa11.89□□□□□ -0.51
CDC42BPB-204ENST00000559043 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 PMCHL1Q16048 86 aa11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 SMPXQ9UHP9 88 aa11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 IGHV7-4-1A0A0J9YVY3 117 aa11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 CRXO43186 299 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 FER1L6-AS1Q8NA97 138 aa11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 CLEC5AQ9NY25 188 aa11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 U3KQK5 164 aa11.88□□□□□ -0.51
CDC42BPB-204ENST00000559043 OR5AL1P0C617 328 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 FAM104BQ5XKR9 115 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 RHPN1-AS1Q9BWJ2 59 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 AGPAT4-IT1Q9H0P7 198 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 PPP1R14DQ9NXH3 145 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 EREGO14944 169 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 LINC01559Q495D7 138 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 SPATA45Q537H7 98 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 C9orf47Q6ZRZ4 202 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 PEMTQ9UBM1 199 aa11.87□□□□□ -0.51
CDC42BPB-204ENST00000559043 ZNF705AQ6ZN79 300 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPB-204ENST00000559043 M0R143 59 aa11.85□□□□□ -0.51
CDC42BPB-204ENST00000559043 IGLL1P15814 213 aa11.85□□□□□ -0.51
CDC42BPB-204ENST00000559043 ZNF138P52744 262 aa11.85□□□□□ -0.51
CDC42BPB-204ENST00000559043 A0A1B0GV90 55 aa11.85□□□□□ -0.51
CDC42BPB-204ENST00000559043 LEPROTL1O95214 131 aa11.85□□□□□ -0.51
CDC42BPB-204ENST00000559043 ORM1P02763 201 aa11.85□□□□□ -0.51
CDC42BPB-204ENST00000559043 SPATA12Q7Z6I5 190 aa11.85□□□□□ -0.51
CDC42BPB-204ENST00000559043 HIST1H1AQ02539 215 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPB-204ENST00000559043 DEFB114Q30KQ6 69 aa11.84□□□□□ -0.51
CDC42BPB-204ENST00000559043 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
CDC42BPB-204ENST00000559043 AMN1Q8IY45 258 aa11.84□□□□□ -0.51
CDC42BPB-204ENST00000559043 SIGLEC8Q9NYZ4 499 aa11.84□□□□□ -0.51
CDC42BPB-204ENST00000559043 D6R8Y8 96 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 SAP30O75446 220 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 IGLC3P0DOY3 106 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 LINC00173Q6ZV60 143 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 AP5S1Q9NUS5 200 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 C20orf202A1L168 122 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 SYS1-DBNDD2H3BUS1 97 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 TWIST1Q15672 202 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 MRPL51Q4U2R6 128 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 ORMDL3Q8N138 153 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 TMEM191AQ9H0A3 160 aa11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 ZMAT5Q9UDW3 170 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-204ENST00000559043 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
CDC42BPB-204ENST00000559043 SOCS3O14543 225 aa11.82□□□□□ -0.52
CDC42BPB-204ENST00000559043 CD300EQ496F6 205 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPB-204ENST00000559043 OXLD1Q5BKU9 147 aa11.82□□□□□ -0.52
CDC42BPB-204ENST00000559043 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms