RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 OR10G9Q8NGN4 311 aa9.15□□□□□ -0.94
VPS18-203ENST00000558855 OR10G7Q8NGN6 311 aa9.15□□□□□ -0.94
VPS18-203ENST00000558855 SPXQ9BT56 116 aa9.15□□□□□ -0.94
VPS18-203ENST00000558855 SH3BGRL3Q9H299 93 aa9.15□□□□□ -0.94
VPS18-203ENST00000558855 A0A087WTM6 91 aa9.14□□□□□ -0.95
VPS18-203ENST00000558855 TRAV4A0A0B4J268 109 aa9.14□□□□□ -0.95
VPS18-203ENST00000558855 GGTLC3B5MD39 225 aa9.14□□□□□ -0.95
VPS18-203ENST00000558855 IGLV2-11P01706 119 aa9.14□□□□□ -0.95
VPS18-203ENST00000558855 PET100P0DJ07 73 aa9.14□□□□□ -0.95
VPS18-203ENST00000558855 PQLC2Q6ZP29 291 aa9.14□□□□□ -0.95
VPS18-203ENST00000558855 TREM1Q9NP99 234 aa9.14□□□□□ -0.95
VPS18-203ENST00000558855 MYCBP2O75592 4640 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 M0R2P5 195 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 STAG3L2P0CL84 134 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 STAG3L3P0CL85 134 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 GATA1P15976 413 aaPredicted RBP9.13□□□□□ -0.95
VPS18-203ENST00000558855 SRIP30626 198 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 CDC34P49427 236 aaPredicted RBP9.13□□□□□ -0.95
VPS18-203ENST00000558855 SLAQ13239 276 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 SUN5Q8TC36 379 aa9.13□□□□□ -0.95
VPS18-203ENST00000558855 TRAV21A0A0B4J279 112 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 ATP6V0CP27449 155 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 GCHFRP30047 84 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 DEFA1P59665 94 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 DEFA3P59666 94 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 HAMPP81172 84 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 OR4C5Q8NGB2 326 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 OR2G3Q8NGZ4 309 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 RAB24Q969Q5 203 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 MSRB1Q9NZV6 116 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 LY96Q9Y6Y9 160 aa9.12□□□□□ -0.95
VPS18-203ENST00000558855 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
VPS18-203ENST00000558855 PGPEP1LA6NFU8 196 aa9.11□□□□□ -0.95
VPS18-203ENST00000558855 TCRAP04437 139 aa9.11□□□□□ -0.95
VPS18-203ENST00000558855 ERVFC1-1P60608 527 aa9.11□□□□□ -0.95
VPS18-203ENST00000558855 ZNF726P1Q15940 193 aa9.11□□□□□ -0.95
VPS18-203ENST00000558855 Q8N3U1 123 aa9.11□□□□□ -0.95
VPS18-203ENST00000558855 C9orf85Q96MD7 179 aa9.11□□□□□ -0.95
VPS18-203ENST00000558855 C9JCJ5 164 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 ORM1P02763 201 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 RNASE3P12724 160 aaKnown RBP9.1□□□□□ -0.95
VPS18-203ENST00000558855 CFAP126Q5VTH2 177 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 Q6ZSN1 163 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 PCNPQ8WW12 178 aaKnown RBP9.1□□□□□ -0.95
VPS18-203ENST00000558855 ASB13Q8WXK3 278 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 LINC00479Q96M42 142 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 AQP10Q96PS8 301 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 SDF2L1Q9HCN8 221 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 Q9UF83 564 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 PSG8Q9UQ74 426 aa9.1□□□□□ -0.95
VPS18-203ENST00000558855 LRCOL1A6NCL2 159 aa9.09□□□□□ -0.95
VPS18-203ENST00000558855 RNF222A6NCQ9 220 aa9.09□□□□□ -0.95
VPS18-203ENST00000558855 RS1O15537 224 aa9.09□□□□□ -0.95
VPS18-203ENST00000558855 GCGP01275 180 aa9.09□□□□□ -0.95
VPS18-203ENST00000558855 ZNF506Q5JVG8 444 aa9.09□□□□□ -0.95
VPS18-203ENST00000558855 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
VPS18-203ENST00000558855 C5orf17Q8NAS9 161 aa9.09□□□□□ -0.95
VPS18-203ENST00000558855 TRAV34A0A0B4J273 112 aa9.08□□□□□ -0.96
VPS18-203ENST00000558855 G3V3Q6 166 aa9.08□□□□□ -0.96
VPS18-203ENST00000558855 CRYGDP07320 174 aa9.08□□□□□ -0.96
VPS18-203ENST00000558855 SUMO1P63165 101 aaKnown RBP9.08□□□□□ -0.96
VPS18-203ENST00000558855 RPL7L1Q6DKI1 246 aaKnown RBP9.08□□□□□ -0.96
VPS18-203ENST00000558855 PRNTQ86SH4 94 aa9.08□□□□□ -0.96
VPS18-203ENST00000558855 NHLRC2Q8NBF2 726 aa9.08□□□□□ -0.96
VPS18-203ENST00000558855 TXNDC17Q9BRA2 123 aa9.08□□□□□ -0.96
VPS18-203ENST00000558855 PSMG3Q9BT73 122 aaPredicted RBP9.08□□□□□ -0.96
VPS18-203ENST00000558855 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
VPS18-203ENST00000558855 IGKV3D-20A0A0C4DH25 116 aa9.07□□□□□ -0.96
VPS18-203ENST00000558855 FBLL1A6NHQ2 334 aaKnown RBP9.07□□□□□ -0.96
VPS18-203ENST00000558855 FLI1Q01543 452 aaPredicted RBP9.07□□□□□ -0.96
VPS18-203ENST00000558855 WFDC2Q14508 124 aa9.07□□□□□ -0.96
VPS18-203ENST00000558855 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
VPS18-203ENST00000558855 NFE4Q86UQ8 179 aa9.07□□□□□ -0.96
VPS18-203ENST00000558855 JPT2Q9H910 190 aa9.07□□□□□ -0.96
VPS18-203ENST00000558855 EPDR1Q9UM22 224 aa9.07□□□□□ -0.96
VPS18-203ENST00000558855 PFN1P07737 140 aaKnown RBP9.06□□□□□ -0.96
VPS18-203ENST00000558855 EVI2AP22794 236 aa9.06□□□□□ -0.96
VPS18-203ENST00000558855 TIRAPP58753 221 aa9.06□□□□□ -0.96
VPS18-203ENST00000558855 KCNS1Q96KK3 526 aa9.06□□□□□ -0.96
VPS18-203ENST00000558855 IGHV3-38A0A0C4DH36 116 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 IGHV3-30P01768 117 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 IGHV3-33P01772 117 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 LINC00694P0DN24 101 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 IGHV3-30-3P0DP02 117 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 IGHV3-30-5P0DP03 117 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 PPT1P50897 306 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 FGF8P55075 233 aaPredicted RBP9.05□□□□□ -0.96
VPS18-203ENST00000558855 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 CDPF1Q6NVV7 123 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 CYB561D1Q8N8Q1 229 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 SAMD10Q9BYL1 202 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 MED28Q9H204 178 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 Q9HAA7 133 aa9.05□□□□□ -0.96
VPS18-203ENST00000558855 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 SERTM2A0A1B0GWG4 89 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 EPM2AB3EWF7 344 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms