RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 TRGV4A0A0C4DH28 118 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 IGHV3-16A0A0C4DH30 117 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 NBDYA0A0U1RRE5 68 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 H3BNG1 76 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 TMEM75Q8N9X5 138 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 OR11H4Q8NGC9 324 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 LINC00479Q96M42 142 aa10.61□□□□□ -0.71
RPL28-207ENST00000558815 FAT2Q9NYQ8 4349 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 KANTRA0A1W2PQU2 76 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 IGLV2-11P01706 119 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 FHITP49789 147 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 ZNF345Q14585 488 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 SMUG1Q53HV7 270 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 ZNF479Q96JC4 524 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 KCNS1Q96KK3 526 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 ZNF471Q9BX82 626 aaPredicted RBP10.6□□□□□ -0.71
RPL28-207ENST00000558815 PRO0255Q9UI72 69 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 ICOSQ9Y6W8 199 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 HECTD4Q9Y4D8 3996 aa10.6□□□□□ -0.71
RPL28-207ENST00000558815 A0A1B0GV50 99 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 FAM74A7A6NL05 159 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 HMSDA8MTL9 139 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 M0R2P5 195 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 PEX7O00628 323 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 CRYBA4P53673 196 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 FHL2Q14192 279 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 Q9H8V8 135 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 C11orf21Q9P2W6 132 aa10.59□□□□□ -0.71
RPL28-207ENST00000558815 A0A0D9SG52 128 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 C9JCJ5 164 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 BCL2L11O43521 198 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 PFDN1O60925 122 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 PPT1P50897 306 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 OR4C5Q8NGB2 326 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 FAM213BQ8TBF2 198 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 RASL10AQ92737 203 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
RPL28-207ENST00000558815 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
RPL28-207ENST00000558815 FBLL1A6NHQ2 334 aaKnown RBP10.57□□□□□ -0.72
RPL28-207ENST00000558815 PFN1P07737 140 aaKnown RBP10.57□□□□□ -0.72
RPL28-207ENST00000558815 SLAQ13239 276 aa10.57□□□□□ -0.72
RPL28-207ENST00000558815 SAPCD1Q5SSQ6 148 aa10.57□□□□□ -0.72
RPL28-207ENST00000558815 CST9LP1Q5W188 147 aa10.57□□□□□ -0.72
RPL28-207ENST00000558815 PCNPQ8WW12 178 aaKnown RBP10.57□□□□□ -0.72
RPL28-207ENST00000558815 TRAV4A0A0B4J268 109 aa10.56□□□□□ -0.72
RPL28-207ENST00000558815 A0A1B0GVY2 172 aa10.56□□□□□ -0.72
RPL28-207ENST00000558815 Q86TA4 180 aa10.56□□□□□ -0.72
RPL28-207ENST00000558815 C6orf223Q8N319 242 aa10.56□□□□□ -0.72
RPL28-207ENST00000558815 NKX6-2Q9C056 277 aaPredicted RBP10.56□□□□□ -0.72
RPL28-207ENST00000558815 SEC11BP0C7V7 166 aa10.55□□□□□ -0.72
RPL28-207ENST00000558815 GYPEP15421 78 aa10.55□□□□□ -0.72
RPL28-207ENST00000558815 UBE2G1P62253 170 aa10.55□□□□□ -0.72
RPL28-207ENST00000558815 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
RPL28-207ENST00000558815 TMUB2Q71RG4 321 aa10.55□□□□□ -0.72
RPL28-207ENST00000558815 SFT2D1Q8WV19 159 aa10.55□□□□□ -0.72
RPL28-207ENST00000558815 HIST1H2BAQ96A08 127 aa10.55□□□□□ -0.72
RPL28-207ENST00000558815 UPK3BQ9BT76 320 aa10.55□□□□□ -0.72
RPL28-207ENST00000558815 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
RPL28-207ENST00000558815 TTC32Q5I0X7 151 aa10.54□□□□□ -0.72
RPL28-207ENST00000558815 KRTAP1-5Q9BYS1 174 aa10.54□□□□□ -0.72
RPL28-207ENST00000558815 UMAD1C9J7I0 102 aa10.53□□□□□ -0.72
RPL28-207ENST00000558815 PAGE4O60829 102 aa10.53□□□□□ -0.72
RPL28-207ENST00000558815 NXPH4O95158 308 aa10.53□□□□□ -0.72
RPL28-207ENST00000558815 S100A4P26447 101 aaKnown RBP10.53□□□□□ -0.72
RPL28-207ENST00000558815 SRIP30626 198 aa10.53□□□□□ -0.72
RPL28-207ENST00000558815 AKR1C3P42330 323 aa10.53□□□□□ -0.72
RPL28-207ENST00000558815 EIF5AP63241 154 aaKnown RBP10.53□□□□□ -0.72
RPL28-207ENST00000558815 TNP2Q05952 138 aa10.53□□□□□ -0.72
RPL28-207ENST00000558815 IGHV3-73A0A0B4J1V6 119 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 IGKV3D-20A0A0C4DH25 116 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 K7EQD1 137 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 M0R036 132 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 ORM1P02763 201 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 TPT1P13693 172 aaKnown RBP10.52□□□□□ -0.73
RPL28-207ENST00000558815 NEGR1Q7Z3B1 354 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 C9orf85Q96MD7 179 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 PKD1P98161 4303 aa10.52□□□□□ -0.73
RPL28-207ENST00000558815 PGPEP1LA6NFU8 196 aa10.51□□□□□ -0.73
RPL28-207ENST00000558815 SIVA1O15304 175 aa10.51□□□□□ -0.73
RPL28-207ENST00000558815 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
RPL28-207ENST00000558815 ZNF506Q5JVG8 444 aa10.51□□□□□ -0.73
RPL28-207ENST00000558815 LYPD5Q6UWN5 251 aa10.51□□□□□ -0.73
RPL28-207ENST00000558815 DPPA3Q6W0C5 159 aa10.51□□□□□ -0.73
RPL28-207ENST00000558815 MBD3L1Q8WWY6 194 aa10.51□□□□□ -0.73
RPL28-207ENST00000558815 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
RPL28-207ENST00000558815 B4DEV8 164 aa10.5□□□□□ -0.73
RPL28-207ENST00000558815 SH2D1AO60880 128 aa10.5□□□□□ -0.73
RPL28-207ENST00000558815 H2AFB1P0C5Y9 115 aa10.5□□□□□ -0.73
RPL28-207ENST00000558815 ASIPP42127 132 aa10.5□□□□□ -0.73
RPL28-207ENST00000558815 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
RPL28-207ENST00000558815 NHLRC2Q8NBF2 726 aa10.5□□□□□ -0.73
RPL28-207ENST00000558815 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
RPL28-207ENST00000558815 hCG_2014768A0A024R1R8 64 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms