RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 A0A087X0K7 114 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 K7EP13 123 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 TWIST1Q15672 202 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 PSMG4Q5JS54 123 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 TMEM190Q8WZ59 177 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 TMEM191AQ9H0A3 160 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 DNAJC9-AS1A6NH13 148 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 LEPROTL1O95214 131 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 IGHG4P01861 327 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 HOXD3P31249 432 aaPredicted RBP8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 ZNF80P51504 273 aaPredicted RBP8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 C12orf54Q6X4T0 127 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 Q6ZQT7 251 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 Q8N976 141 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 OR11H1Q8NG94 326 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 ZNF469Q96JG9 3925 aaPredicted RBP8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 S100A4P26447 101 aaKnown RBP8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 PSMB8P28062 276 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 CRIP1P50238 77 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 EBLN2Q6P2I7 272 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 PRSS57Q6UWY2 283 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 WIPF2Q8TF74 440 aaPredicted RBP8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 RAB37Q96AX2 223 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 UFC1Q9Y3C8 167 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 IGHV7-4-1A0A0J9YVY3 117 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 FBLL1A6NHQ2 334 aaKnown RBP8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 IGLV1-40P01703 118 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 RPL24P83731 157 aaKnown RBP8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 FOXE3Q13461 319 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
CSPG4P5-201ENST00000558731 A0A1B0GUT8 65 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 TMEM213A2RRL7 107 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 RNASE4P34096 147 aaKnown RBP8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 ZNF138P52744 262 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 H3BUA1 57 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 BMI1P35226 326 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 C19orf54Q5BKX5 351 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 DYNLRB2Q8TF09 96 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 C20orf173Q96LM9 149 aa8.24□□□□□ -1.09
CSPG4P5-201ENST00000558731 SAP30O75446 220 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 GDF5OSQ5U4N7 250 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 SMIM12Q96EX1 92 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 FABP5P3A8MUU1 101 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 FXYD7P58549 80 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 SMPXQ9UHP9 88 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 SETXQ7Z333 2677 aaKnown RBP8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 C19orf71A6NCJ1 209 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 RIGQ13278 110 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 KIR3DS1Q14943 382 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 C9orf139Q6ZV77 190 aa8.23□□□□□ -1.09
CSPG4P5-201ENST00000558731 TMEM238C9JI98 176 aa8.22□□□□□ -1.09
CSPG4P5-201ENST00000558731 FER1L6-AS1Q8NA97 138 aa8.22□□□□□ -1.09
CSPG4P5-201ENST00000558731 MAP1LC3CQ9BXW4 147 aa8.22□□□□□ -1.09
CSPG4P5-201ENST00000558731 CSTL1Q9H114 145 aa8.22□□□□□ -1.09
CSPG4P5-201ENST00000558731 ZNF492Q9P255 531 aa8.22□□□□□ -1.09
CSPG4P5-201ENST00000558731 MBD6Q96DN6 1003 aa8.22□□□□□ -1.09
CSPG4P5-201ENST00000558731 C7orf71A4D174 169 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 LGALS1P09382 135 aaKnown RBP8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 NSUN5P1Q3KNT7 163 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 TCTEX1D4Q5JR98 221 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 Q6ZSV7 163 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 GTF2H5Q6ZYL4 71 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 ZNF418Q8TF45 676 aaPredicted RBP8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 M0R381 172 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 NCR2O95944 276 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 ELANEP08246 267 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 ID1P41134 155 aa8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 CRIP2P52943 208 aaPredicted RBP8.21□□□□□ -1.09
CSPG4P5-201ENST00000558731 TRAV12-2A0A075B6T6 113 aa8.21□□□□□ -1.1
CSPG4P5-201ENST00000558731 SMKR1H3BMG3 65 aa8.21□□□□□ -1.1
CSPG4P5-201ENST00000558731 TAX1BP3O14907 124 aa8.21□□□□□ -1.1
CSPG4P5-201ENST00000558731 SPANXN1Q5VSR9 72 aa8.21□□□□□ -1.1
CSPG4P5-201ENST00000558731 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
CSPG4P5-201ENST00000558731 ESM1Q9NQ30 184 aa8.21□□□□□ -1.1
CSPG4P5-201ENST00000558731 MSRB1Q9NZV6 116 aa8.21□□□□□ -1.1
CSPG4P5-201ENST00000558731 H3BUT2 72 aa8.2□□□□□ -1.1
CSPG4P5-201ENST00000558731 H3BVH4 76 aa8.2□□□□□ -1.1
CSPG4P5-201ENST00000558731 BVES-AS1Q5T3Y7 98 aa8.2□□□□□ -1.1
CSPG4P5-201ENST00000558731 AMN1Q8IY45 258 aa8.2□□□□□ -1.1
CSPG4P5-201ENST00000558731 PPBPP02775 128 aa8.2□□□□□ -1.1
CSPG4P5-201ENST00000558731 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
CSPG4P5-201ENST00000558731 ATRQ13535 2644 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 TRAV8-6A0A0B4J262 113 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 FSHBP01225 129 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 SNRPD3P62318 126 aaKnown RBP8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 OR8A1Q8NGG7 326 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 OR1N2Q8NGR9 330 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 DEFB104AQ8WTQ1 72 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 MS4A6AQ9H2W1 248 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 ST20Q9HBF5 79 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 CFHR3Q02985 330 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 TEX29Q8N6K0 151 aa8.19□□□□□ -1.1
CSPG4P5-201ENST00000558731 OR5AL1P0C617 328 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms