RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 MFAP2P55001 183 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 PROK1P58294 105 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 PLGLAQ15195 96 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 HIST3H2BBQ8N257 126 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 GBGT1Q8N5D6 347 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 OR2T6Q8NHC8 308 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 USMG5Q96IX5 58 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 LINC00479Q96M42 142 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 PSMG3Q9BT73 122 aaPredicted RBP3.12□□□□□ -1.91
ZEB1-212ENST00000558655 GGTLC1Q9BX51 225 aa3.12□□□□□ -1.91
ZEB1-212ENST00000558655 MRPL27Q9P0M9 148 aaKnown RBP3.12□□□□□ -1.91
ZEB1-212ENST00000558655 IGKV1OR2-108A0A075B7D4 117 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 TRAV1-1A0A0B4J248 108 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 LINC01548A6NM66 108 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 I3L2K1 104 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 S100A2P29034 98 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 APOC4P55056 127 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 SERF2P84101 59 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 Q75L30 129 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 DLX4Q92988 240 aaPredicted RBP3.11□□□□□ -1.91
ZEB1-212ENST00000558655 ACY3Q96HD9 319 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 NBEAL1Q6ZS30 2694 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 ZNF705GA8MUZ8 300 aaPredicted RBP3.11□□□□□ -1.91
ZEB1-212ENST00000558655 F2Z2F3 143 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 J3KT08 172 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 K7EIM0 57 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 SRIP30626 198 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 LAGE3Q14657 143 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 UNQ5815/PRO19632Q6UWF5 114 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 NEGR1Q7Z3B1 354 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 TMEM256Q8N2U0 113 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 Q8N3U1 123 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 LINC01006Q8NI28 216 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 C2orf48Q96LS8 159 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 HIST1H2BLQ99880 126 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 C1QTNF4Q9BXJ3 329 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 MRPL36Q9P0J6 103 aaKnown RBP3.11□□□□□ -1.91
ZEB1-212ENST00000558655 NAT8Q9UHE5 227 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 S4R3C0 116 aa3.11□□□□□ -1.91
ZEB1-212ENST00000558655 A0A087WWC5 75 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 PHOX2AO14813 284 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 CBLN1P23435 193 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 KIAA1644Q3SXP7 199 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 PAPPA-AS1Q5QFB9 102 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 DPPA3Q6W0C5 159 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 CYP2G1PQ6ZSU1 146 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 EXOC3-AS1Q8N2X6 119 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 ZNF414Q96IQ9 312 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 TRBV7-1A0A0A6YYK4 115 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 G3V318 75 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 SMKR1H3BMG3 65 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 M0R2Z0 102 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 PYYP10082 97 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 ORM2P19652 201 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 NTF3P20783 257 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 CRYBB3P26998 211 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 TSPOP30536 169 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 OR10J1P30954 320 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 ZNF90Q03938 601 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 Q6ZWC4 215 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.1□□□□□ -1.91
ZEB1-212ENST00000558655 ZNF491Q8N8L2 437 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 TIMM9Q9Y5J7 89 aa3.1□□□□□ -1.91
ZEB1-212ENST00000558655 LOC107984640A0A0U1RRK4 108 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GAGE12JA6NER3 117 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 C9JAW5 83 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 C17orf112F2Z3M2 114 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GAGE7O76087 117 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GAGE12FP0CL80 117 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GAGE12GP0CL81 117 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GAGE12IP0CL82 117 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 PSG1P11464 419 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GCHFRP30047 84 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GPR183P32249 361 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 CTRLP40313 264 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 RND2P52198 227 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GAGE4Q13068 117 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 GAGE13Q4V321 117 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 HRCT1Q6UXD1 115 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 ZNF664Q8N3J9 261 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 TRGV9Q99603 122 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 HIGD1AQ9Y241 93 aa3.09□□□□□ -1.91
ZEB1-212ENST00000558655 A0A1B0GX51 115 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 BUB3O43684 328 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 NDUFB8O95169 186 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 LGALS1P09382 135 aaKnown RBP3.09□□□□□ -1.92
ZEB1-212ENST00000558655 OR5AL1P0C617 328 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 MGST1P10620 155 aaKnown RBP3.09□□□□□ -1.92
ZEB1-212ENST00000558655 ERVFC1-1P60608 527 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 YPEL3P61236 119 aaPredicted RBP3.09□□□□□ -1.92
ZEB1-212ENST00000558655 RHOGP84095 191 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 ECSCRQ19T08 205 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 GOLT1AQ6ZVE7 132 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 BLNKQ8WV28 456 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 C4orf3Q8WVX3 66 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 FAM103A1Q9BTL3 118 aaKnown RBP3.09□□□□□ -1.92
ZEB1-212ENST00000558655 SMDT1Q9H4I9 107 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 NAT8BQ9UHF3 227 aa3.09□□□□□ -1.92
ZEB1-212ENST00000558655 RNF114Q9Y508 228 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms