RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PHLDA1Q8WV24 401 aaPredicted RBP11□□□□□ -0.65
LINC01220-201ENST00000558575 TXNDC17Q9BRA2 123 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 DERL1Q9BUN8 251 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 NOP10Q9NPE3 64 aaKnown RBP11□□□□□ -0.65
LINC01220-201ENST00000558575 GSN-AS1Q9NRJ2 163 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 ZFP30Q9Y2G7 519 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 GNRH2O43555 120 aa10.99□□□□□ -0.65
LINC01220-201ENST00000558575 MEF2BQ02080 365 aaPredicted RBP10.99□□□□□ -0.65
LINC01220-201ENST00000558575 CEMP1Q6PRD7 247 aaPredicted RBP10.99□□□□□ -0.65
LINC01220-201ENST00000558575 ZC2HC1AQ96GY0 325 aa10.99□□□□□ -0.65
LINC01220-201ENST00000558575 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
LINC01220-201ENST00000558575 VAX2Q9UIW0 290 aa10.99□□□□□ -0.65
LINC01220-201ENST00000558575 TIMM8BQ9Y5J9 83 aaPredicted RBP10.99□□□□□ -0.65
LINC01220-201ENST00000558575 LYRM9A8MSI8 78 aa10.98□□□□□ -0.65
LINC01220-201ENST00000558575 IFNA1P01562 189 aa10.98□□□□□ -0.65
LINC01220-201ENST00000558575 PFN1P07737 140 aaKnown RBP10.98□□□□□ -0.65
LINC01220-201ENST00000558575 UBE2G1P62253 170 aa10.98□□□□□ -0.65
LINC01220-201ENST00000558575 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
LINC01220-201ENST00000558575 ZNF575Q86XF7 245 aa10.98□□□□□ -0.65
LINC01220-201ENST00000558575 LINC00612Q8N6U2 182 aa10.98□□□□□ -0.65
LINC01220-201ENST00000558575 MLST8Q9BVC4 326 aa10.98□□□□□ -0.65
LINC01220-201ENST00000558575 RBFOX3A6NFN3 312 aa10.97□□□□□ -0.65
LINC01220-201ENST00000558575 S100A9P06702 114 aaKnown RBP10.97□□□□□ -0.65
LINC01220-201ENST00000558575 RPL35P42766 123 aaKnown RBP10.97□□□□□ -0.65
LINC01220-201ENST00000558575 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
LINC01220-201ENST00000558575 TMEM183AQ8IXX5 376 aa10.97□□□□□ -0.65
LINC01220-201ENST00000558575 NHLRC2Q8NBF2 726 aa10.97□□□□□ -0.65
LINC01220-201ENST00000558575 NAGKQ9UJ70 344 aa10.97□□□□□ -0.65
LINC01220-201ENST00000558575 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
LINC01220-201ENST00000558575 DNAH2Q9P225 4427 aa10.97□□□□□ -0.65
LINC01220-201ENST00000558575 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 RAB19A4D1S5 217 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 TYMSP04818 313 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 DEFB130BP0DP73 79 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 DEFB130AP0DP74 79 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 TAGLN2P37802 199 aaKnown RBP10.96□□□□□ -0.65
LINC01220-201ENST00000558575 TCL1AP56279 114 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 ZNF506Q5JVG8 444 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 IBA57Q5T440 356 aaKnown RBP10.96□□□□□ -0.65
LINC01220-201ENST00000558575 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 BAGE2Q86Y30 109 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 MED9Q9NWA0 146 aa10.96□□□□□ -0.65
LINC01220-201ENST00000558575 IGHV3-16A0A0C4DH30 117 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 TEX48A0A1B0GUV7 120 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 A0A1B0GVY2 172 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 FABP5P3A8MUU1 101 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 PDE6DO43924 150 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 IGLV2-8P01709 118 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 DAD1P61803 113 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 ZNF674Q2M3X9 581 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 Q6ZTI0 123 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 DNAH17Q9UFH2 4485 aa10.95□□□□□ -0.66
LINC01220-201ENST00000558575 PKD1P98161 4303 aa10.94□□□□□ -0.66
LINC01220-201ENST00000558575 TRBV20OR9-2A0A075B6H5 130 aa10.94□□□□□ -0.66
LINC01220-201ENST00000558575 TRAV10A0A0B4J240 114 aa10.94□□□□□ -0.66
LINC01220-201ENST00000558575 SPINK4O60575 86 aa10.94□□□□□ -0.66
LINC01220-201ENST00000558575 SH2D1AO60880 128 aa10.94□□□□□ -0.66
LINC01220-201ENST00000558575 IFITM2Q01629 132 aa10.94□□□□□ -0.66
LINC01220-201ENST00000558575 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
LINC01220-201ENST00000558575 TRGV11A0A075B6L2 103 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 DEFB131BA0A096LNP1 70 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 GAGE12BA1L429 117 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 GAGE7O76087 117 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 GAGE12FP0CL80 117 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 GAGE12GP0CL81 117 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 GAGE12IP0CL82 117 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 TOR2AQ5JU69 321 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 KCNS1Q96KK3 526 aa10.93□□□□□ -0.66
LINC01220-201ENST00000558575 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
LINC01220-201ENST00000558575 CENPWQ5EE01 88 aa10.92□□□□□ -0.66
LINC01220-201ENST00000558575 FAM162BQ5T6X4 162 aa10.92□□□□□ -0.66
LINC01220-201ENST00000558575 SDF2L1Q9HCN8 221 aa10.92□□□□□ -0.66
LINC01220-201ENST00000558575 HERC1Q15751 4861 aa10.92□□□□□ -0.66
LINC01220-201ENST00000558575 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
LINC01220-201ENST00000558575 PGPEP1LA6NFU8 196 aa10.91□□□□□ -0.66
LINC01220-201ENST00000558575 KRBOX1C9JBD0 128 aa10.91□□□□□ -0.66
LINC01220-201ENST00000558575 RNASE3P12724 160 aaKnown RBP10.91□□□□□ -0.66
LINC01220-201ENST00000558575 MRPL16Q9NX20 251 aaKnown RBP10.91□□□□□ -0.66
LINC01220-201ENST00000558575 KLK5Q9Y337 293 aaPredicted RBP10.91□□□□□ -0.66
LINC01220-201ENST00000558575 C9JQL5 133 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 TMEM250H0YL14 139 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 M0R036 132 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 ORM1P02763 201 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 SRP19P09132 144 aaKnown RBP10.9□□□□□ -0.66
LINC01220-201ENST00000558575 HTN3P15516 51 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 SRSF3P84103 164 aaKnown RBP10.9□□□□□ -0.66
LINC01220-201ENST00000558575 LGALS9BQ3B8N2 356 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 C9orf85Q96MD7 179 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 C18orf15Q96N68 181 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 SPXQ9BT56 116 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 EIF5A2Q9GZV4 153 aaKnown RBP10.9□□□□□ -0.66
LINC01220-201ENST00000558575 APLNQ9ULZ1 77 aa10.9□□□□□ -0.66
LINC01220-201ENST00000558575 IGLL5B9A064 214 aa10.89□□□□□ -0.67
LINC01220-201ENST00000558575 NDUFS6O75380 124 aaKnown RBP10.89□□□□□ -0.67
LINC01220-201ENST00000558575 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
LINC01220-201ENST00000558575 RASL10AQ92737 203 aa10.89□□□□□ -0.67
LINC01220-201ENST00000558575 PARLQ9H300 379 aa10.89□□□□□ -0.67
LINC01220-201ENST00000558575 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms