RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 APLNQ9ULZ1 77 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 IGHV4-4A0A075B6R2 117 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 LCE6AA0A183 80 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 FABP5P3A8MUU1 101 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 SPINK4O60575 86 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 IFNA1P01562 189 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 TYMSP04818 313 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 S100A9P06702 114 aaKnown RBP8.82□□□□□ -1
LRRC28-206ENST00000558471 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
LRRC28-206ENST00000558471 ZNF415Q09FC8 603 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 LYPD6BQ8NI32 183 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 ZC2HC1AQ96GY0 325 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 KCNS1Q96KK3 526 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 TXNDC17Q9BRA2 123 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 SDF2L1Q9HCN8 221 aa8.82□□□□□ -1
LRRC28-206ENST00000558471 TRGV1A0A0A0MS02 117 aa8.81□□□□□ -1
LRRC28-206ENST00000558471 IGHV3-16A0A0C4DH30 117 aa8.81□□□□□ -1
LRRC28-206ENST00000558471 ATP5G1P05496 136 aa8.81□□□□□ -1
LRRC28-206ENST00000558471 BCL2P10415 239 aa8.81□□□□□ -1
LRRC28-206ENST00000558471 TCTAP57738 103 aa8.81□□□□□ -1
LRRC28-206ENST00000558471 C11orf52Q96A22 123 aa8.81□□□□□ -1
LRRC28-206ENST00000558471 VAX2Q9UIW0 290 aa8.81□□□□□ -1
LRRC28-206ENST00000558471 SACSQ9NZJ4 4579 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 IGKV3D-20A0A0C4DH25 116 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 F5H768 121 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 RPL35P42766 123 aaKnown RBP8.8□□□□□ -1
LRRC28-206ENST00000558471 LGALS9BQ3B8N2 356 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 BAGE2Q86Y30 109 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 NHLRC2Q8NBF2 726 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 SPXQ9BT56 116 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 DERL1Q9BUN8 251 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 MLST8Q9BVC4 326 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 MRPL16Q9NX20 251 aaKnown RBP8.8□□□□□ -1
LRRC28-206ENST00000558471 MUC4Q99102 2169 aa8.8□□□□□ -1
LRRC28-206ENST00000558471 TRGV2A0A075B6R0 118 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 PDE6DO43924 150 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 SH2D1AO60880 128 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 TAGLN2P37802 199 aaKnown RBP8.79□□□□□ -1
LRRC28-206ENST00000558471 ZNF674Q2M3X9 581 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 FAM162BQ5T6X4 162 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 TMEM88Q6PEY1 159 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 TEX261Q6UWH6 196 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 LINC00476Q8WZB0 136 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 FAM210BQ96KR6 192 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 C18orf15Q96N68 181 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 NDUFAF3Q9BU61 184 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 MED9Q9NWA0 146 aa8.79□□□□□ -1
LRRC28-206ENST00000558471 DNAH1Q9P2D7 4330 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 RAB19A4D1S5 217 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 RBFOX3A6NFN3 312 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 LY6G6CO95867 125 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 ORM1P02763 201 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 HOXA5P20719 270 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 OR5I1Q13606 314 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 RASL10AQ92737 203 aa8.78□□□□□ -1
LRRC28-206ENST00000558471 NACAE9PAV3 2078 aa8.77□□□□□ -1
LRRC28-206ENST00000558471 ALMS1Q8TCU4 4167 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 KRBOX1C9JBD0 128 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 M0R036 132 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 M0R2P5 195 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 RNASE3P12724 160 aaKnown RBP8.77□□□□□ -1.01
LRRC28-206ENST00000558471 LGALS9CQ6DKI2 356 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 PCNPQ8WW12 178 aaKnown RBP8.77□□□□□ -1.01
LRRC28-206ENST00000558471 C9orf85Q96MD7 179 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 LYSTQ99698 3801 aa8.77□□□□□ -1.01
LRRC28-206ENST00000558471 B4DEV8 164 aa8.76□□□□□ -1.01
LRRC28-206ENST00000558471 IGLV2-8P01709 118 aa8.76□□□□□ -1.01
LRRC28-206ENST00000558471 IGHV3-53P01767 116 aa8.76□□□□□ -1.01
LRRC28-206ENST00000558471 CENPWQ5EE01 88 aa8.76□□□□□ -1.01
LRRC28-206ENST00000558471 ZNF506Q5JVG8 444 aa8.76□□□□□ -1.01
LRRC28-206ENST00000558471 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
LRRC28-206ENST00000558471 TRAV26-1A0A087WT03 109 aa8.75□□□□□ -1.01
LRRC28-206ENST00000558471 GRIFINA4D1Z8 144 aa8.75□□□□□ -1.01
LRRC28-206ENST00000558471 LINC01559Q495D7 138 aa8.75□□□□□ -1.01
LRRC28-206ENST00000558471 TOR2AQ5JU69 321 aa8.75□□□□□ -1.01
LRRC28-206ENST00000558471 POM121L12Q8N7R1 296 aa8.75□□□□□ -1.01
LRRC28-206ENST00000558471 TMSB15BA0A087X1C1 80 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 A0A0J9YY99 117 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 PGPEP1LA6NFU8 196 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 C9JCJ5 164 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 SFTA3P0C7M3 94 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 S100A4P26447 101 aaKnown RBP8.74□□□□□ -1.01
LRRC28-206ENST00000558471 ASIPP42127 132 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 GNG4P50150 75 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 ZNF876PQ49A33 203 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 DNLZQ5SXM8 178 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 FAM210AQ96ND0 272 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 EIF5A2Q9GZV4 153 aaKnown RBP8.74□□□□□ -1.01
LRRC28-206ENST00000558471 VPS13DQ5THJ4 4388 aa8.74□□□□□ -1.01
LRRC28-206ENST00000558471 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
LRRC28-206ENST00000558471 NUDT3O95989 172 aa8.73□□□□□ -1.01
LRRC28-206ENST00000558471 ARMS2P0C7Q2 107 aa8.73□□□□□ -1.01
LRRC28-206ENST00000558471 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
LRRC28-206ENST00000558471 RPL19P84098 196 aaKnown RBP8.73□□□□□ -1.01
LRRC28-206ENST00000558471 FHL2Q14192 279 aa8.73□□□□□ -1.01
LRRC28-206ENST00000558471 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms