RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 TRIOBPQ9H2D6 2365 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 CUL9Q8IWT3 2517 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 RANBP2P49792 3224 aaKnown RBP4.29□□□□□ -1.72
GABPB1-207ENST00000558335 UNC80Q8N2C7 3258 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 SPTBN5Q9NRC6 3674 aaKnown RBP4.28□□□□□ -1.72
GABPB1-207ENST00000558335 TRAV8-2A0A0B4J237 113 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 TRAV4A0A0B4J268 109 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 LOC107984640A0A0U1RRK4 108 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 MYMXA0A1B0GTQ4 84 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 ODF3BA8MYP8 253 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 ATOX1O00244 68 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 TIMM23O14925 209 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 COX7A1P24310 79 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 MRPS36P82909 103 aaKnown RBP4.28□□□□□ -1.72
GABPB1-207ENST00000558335 CD164Q04900 197 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 TWIST1Q15672 202 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 ANXA2RQ3ZCQ2 193 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 FAM110DQ8TAY7 271 aaPredicted RBP4.28□□□□□ -1.72
GABPB1-207ENST00000558335 IFI27L1Q96BM0 104 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 CARD19Q96LW7 228 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 PRR25Q96S07 402 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 CHAC1Q9BUX1 264 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 TPSG1Q9NRR2 321 aa4.28□□□□□ -1.72
GABPB1-207ENST00000558335 NHP2Q9NX24 153 aaKnown RBP4.28□□□□□ -1.72
GABPB1-207ENST00000558335 MRPL36Q9P0J6 103 aaKnown RBP4.28□□□□□ -1.72
GABPB1-207ENST00000558335 ZNF256Q9Y2P7 627 aaPredicted RBP4.28□□□□□ -1.72
GABPB1-207ENST00000558335 ZDBF2Q9HCK1 2354 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 IGHV3-72A0A0B4J1Y9 119 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 TRAV13-1A0A0B4J241 112 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 A0A1W2PRX2 142 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 TMEM89A2RUT3 159 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 ZNF785A8K8V0 405 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
GABPB1-207ENST00000558335 SH2D1AO60880 128 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 ARMS2P0C7Q2 107 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 SLC25A16P16260 332 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 PLNP26678 52 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 FCER1GP30273 86 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 NBL1P41271 181 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 C4orf26Q17RF5 130 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 TMEM170BQ5T4T1 132 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 LYZL1Q6UWQ5 148 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 EXOC3-AS1Q8N2X6 119 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 EEF1AKMT3Q96AZ1 226 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 URB1-AS1Q96HZ7 61 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 METTL26Q96S19 204 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 ZNRD1Q9P1U0 126 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 LAMA1P25391 3075 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 SZT2Q5T011 3432 aa4.27□□□□□ -1.73
GABPB1-207ENST00000558335 TNCP24821 2201 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 NCBP2LA6PVI3 153 aaKnown RBP4.26□□□□□ -1.73
GABPB1-207ENST00000558335 D6R8Y8 96 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 H3BUA1 57 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 IGHV3-48P01763 117 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 P0DMU3 169 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 FAM231AP0DMU4 169 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 FAM231CP0DMU5 169 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 MED14OSP0DP75 135 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 RPL35AP18077 110 aaKnown RBP4.26□□□□□ -1.73
GABPB1-207ENST00000558335 UBE2E1P51965 193 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 FXYD2P54710 66 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 UBE2D3P61077 147 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 UBE2D2P62837 147 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 ORMDL2Q53FV1 153 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 ASPHD1Q5U4P2 390 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 LINC00322Q6ZN03 302 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-207ENST00000558335 FAM223AQ8IWN6 122 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 Q8N6K4 173 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 Q8N8P6 123 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 PRSS33Q8NF86 280 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 LINC00477Q96M19 166 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
GABPB1-207ENST00000558335 IGHV4-4A0A075B6R2 117 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 TRAV12-2A0A075B6T6 113 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 TRAV8-1A0A0A6YYK1 113 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 TRIOO75962 3097 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 IGKCP01834 107 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 PF4P02776 101 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 EDN2P20800 178 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 COL8A2P25067 703 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 PLA2G5P39877 138 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 IFI27P40305 119 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-207ENST00000558335 ZNF138P52744 262 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 LOXL1Q08397 574 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-207ENST00000558335 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
GABPB1-207ENST00000558335 DEFB121Q5J5C9 76 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 Q5XG85 94 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 HRCT1Q6UXD1 115 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 VMO1Q7Z5L0 202 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 LINC00643Q86TS7 51 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 OR8A1Q8NGG7 326 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 RITA1Q96K30 269 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 FANCD2OSQ96PS1 177 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
GABPB1-207ENST00000558335 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 IGHV3-21A0A0B4J1V1 117 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms