RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 ZNF134P52741 427 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 PRB3Q04118 309 aaPredicted RBP6.24□□□□□ -1.41
RTF1-205ENST00000558298 RRN3P1Q2M238 152 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 SPINK9Q5DT21 86 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 UTF1Q5T230 341 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 Q8N6K4 173 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 OR8A1Q8NGG7 326 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 RFESDQ8TAC1 157 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 RITA1Q96K30 269 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 DUX5Q96PT3 197 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 TRGV9Q99603 122 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 ZMAT4Q9H898 229 aa6.24□□□□□ -1.41
RTF1-205ENST00000558298 IGHV1-3A0A0C4DH29 117 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 PGPA6NDG6 321 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 IGKCP01834 107 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 IL4P05112 153 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 FAM106CPP0CH98 169 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 FCGR2BP31994 310 aaPredicted RBP6.23□□□□□ -1.41
RTF1-205ENST00000558298 ARL3P36405 182 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 PROK1P58294 105 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 RPS16P62249 146 aaKnown RBP6.23□□□□□ -1.41
RTF1-205ENST00000558298 CACNG7P62955 275 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 MRPL23Q16540 153 aaKnown RBP6.23□□□□□ -1.41
RTF1-205ENST00000558298 Q6ZSV7 163 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 Q86TA4 180 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 WFDC12Q8WWY7 111 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 RAB37Q96AX2 223 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 PRELID3AQ96N28 172 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 SPAG8Q99932 426 aaPredicted RBP6.23□□□□□ -1.41
RTF1-205ENST00000558298 TMEM126AQ9H061 195 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 MAP1LC3AQ9H492 121 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
RTF1-205ENST00000558298 MGAM2Q2M2H8 2515 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 TIMM23O14925 209 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 MOSP00540 346 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 SAA2P0DJI9 122 aaPredicted RBP6.22□□□□□ -1.41
RTF1-205ENST00000558298 RNASE2P10153 161 aaKnown RBP6.22□□□□□ -1.41
RTF1-205ENST00000558298 PDE6HQ13956 83 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 FAM104BQ5XKR9 115 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 LINC00173Q6ZV60 143 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 LINC00305Q7Z4B0 112 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 OR4C13Q8NGP0 309 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 LINC01006Q8NI28 216 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 PHLDA1Q8WV24 401 aaPredicted RBP6.22□□□□□ -1.41
RTF1-205ENST00000558298 RNF5Q99942 180 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 MOB4Q9Y3A3 225 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 HILPDAQ9Y5L2 63 aa6.22□□□□□ -1.41
RTF1-205ENST00000558298 VWFP04275 2813 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 IGHV3-43A0A0B4J1X8 118 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 GAGE12JA6NER3 117 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 SH2D7A6NKC9 451 aaPredicted RBP6.21□□□□□ -1.42
RTF1-205ENST00000558298 NPIPB5A8MRT5 1133 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 SCGB2A1O75556 95 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 GAGE7O76087 117 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 GAGE12FP0CL80 117 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 GAGE12GP0CL81 117 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 GAGE12IP0CL82 117 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 IGHV3-43DP0DP04 118 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 FCER1GP30273 86 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 GAGE4Q13068 117 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 ETDBQ3ZM63 59 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 SHISA2Q6UWI4 295 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 Q6ZUT4 128 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 COX8CQ7Z4L0 72 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 MOB3BQ86TA1 216 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 TEN1Q86WV5 123 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 C5orf56Q8N8D9 126 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 LEAP2Q969E1 77 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 CITED1Q99966 193 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 CITED2Q99967 270 aaPredicted RBP6.21□□□□□ -1.42
RTF1-205ENST00000558298 ZNF702PQ9H963 129 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 NDUFA4L2Q9NRX3 87 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 NHP2Q9NX24 153 aaKnown RBP6.21□□□□□ -1.42
RTF1-205ENST00000558298 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
RTF1-205ENST00000558298 TRBV25-1A0A075B6N4 114 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 PROP1O75360 226 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 NDUFA3O95167 84 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 DIAPH2-AS1Q14236 149 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 C12orf74Q32Q52 190 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 PRR31Q5SQ13 230 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 FAM53AQ6NSI3 398 aaPredicted RBP6.2□□□□□ -1.42
RTF1-205ENST00000558298 SYT8Q8NBV8 401 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 NPBQ8NG41 125 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 SRSF8Q9BRL6 282 aaKnown RBP6.2□□□□□ -1.42
RTF1-205ENST00000558298 HINT2Q9BX68 163 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 Q9H3A6 140 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 WNK1Q9H4A3 2382 aa6.2□□□□□ -1.42
RTF1-205ENST00000558298 CMYA5Q8N3K9 4069 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 IGKV1OR2-108A0A075B7D4 117 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 IGHG2P01859 326 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 CLEC3BP05452 202 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 CSN3P07498 182 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 ZNF688P0C7X2 276 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 GP9P14770 177 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 CKS2P33552 79 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 IFI27P40305 119 aaPredicted RBP6.19□□□□□ -1.42
RTF1-205ENST00000558298 KRTAP10-3P60369 221 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 WFDC2Q14508 124 aa6.19□□□□□ -1.42
RTF1-205ENST00000558298 PAPPA-AS1Q5QFB9 102 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms