RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 RNF212Q495C1 297 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 ZNF575Q86XF7 245 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 C5orf17Q8NAS9 161 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 ISOC2Q96AB3 205 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 C17orf77Q96MU5 243 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 GPR82Q96P67 336 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 DERL1Q9BUN8 251 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 Q9H3A6 140 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 TRBV19A0A075B6N1 114 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 IGHV4-4A0A075B6R2 117 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 DEFB131BA0A096LNP1 70 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 PGPA6NDG6 321 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 ZNF705FA8MVS1 300 aaPredicted RBP5.4□□□□□ -1.54
SPG11-205ENST00000558080 MRPS12O15235 138 aaKnown RBP5.4□□□□□ -1.54
SPG11-205ENST00000558080 ZNF705DP0CH99 300 aaPredicted RBP5.4□□□□□ -1.54
SPG11-205ENST00000558080 ZNF705BP0CI00 300 aaPredicted RBP5.4□□□□□ -1.54
SPG11-205ENST00000558080 TCTAP57738 103 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 CENPWQ5EE01 88 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 ZNF705AQ6ZN79 300 aaPredicted RBP5.4□□□□□ -1.54
SPG11-205ENST00000558080 RNF182Q8N6D2 247 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 CMTM2Q8TAZ6 248 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 SMIM12Q96EX1 92 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 YPEL4Q96NS1 127 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 CLUHP3Q96NS8 147 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 NEU1Q99519 415 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 ATG101Q9BSB4 218 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 ZNF586Q9NXT0 402 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 EPDR1Q9UM22 224 aa5.4□□□□□ -1.54
SPG11-205ENST00000558080 MUC4Q99102 2169 aa5.4□□□□□ -1.55
SPG11-205ENST00000558080 KMT2AQ03164 3969 aa5.4□□□□□ -1.55
SPG11-205ENST00000558080 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 TRBV20OR9-2A0A075B6H5 130 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 TRAV8-2A0A0B4J237 113 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 SERTM2A0A1B0GWG4 89 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 SMIM9A6NGZ8 99 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 ZNF253O75346 499 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 PRB4P10163 310 aaPredicted RBP5.39□□□□□ -1.55
SPG11-205ENST00000558080 RAB5AP20339 215 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 UBE2G1P62253 170 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 TMEM183BQ1AE95 376 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 SAMD13Q5VXD3 122 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 KCNIP4Q6PIL6 250 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 Q6ZSN1 163 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 C1orf158Q8N1D5 194 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 ARL6IP6Q8N6S5 226 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 ZNF738Q8NE65 137 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 OR10G8Q8NGN5 311 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 OCC1Q8TAD7 63 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 SFRP2Q96HF1 295 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 FMC1Q96HJ9 113 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 BTF3L4Q96K17 158 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 IGF2BP2-AS1Q96M15 143 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 AAMDCQ9H7C9 122 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 GOLT1BQ9Y3E0 138 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 FRAS1Q86XX4 4008 aa5.39□□□□□ -1.55
SPG11-205ENST00000558080 TRBV24-1A0A075B6N3 115 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 A0A087X0K7 114 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 TRBV6-1A0A0K0K1D8 114 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 TMEM189A5PLL7 270 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 PGPEP1LA6NFU8 196 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 C1orf196B1AJZ1 125 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 H3BTX0 84 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 K7EQM0 130 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 M0R2Z0 102 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 DUSP14O95147 198 aaKnown RBP5.38□□□□□ -1.55
SPG11-205ENST00000558080 GCGP01275 180 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 TCRAP04437 139 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 SNRPCP09234 159 aaKnown RBP5.38□□□□□ -1.55
SPG11-205ENST00000558080 CSN1S1P47710 185 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 GNG5P63218 68 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 ELOBQ15370 118 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 FAM222AQ5U5X8 452 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 AMTNQ6UX39 209 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 BAGE2Q86Y30 109 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 TMEM208Q9BTX3 173 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 BIN3Q9NQY0 253 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 OSTCQ9NRP0 149 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 RPH3ALQ9UNE2 315 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 KLF12Q9Y4X4 402 aa5.38□□□□□ -1.55
SPG11-205ENST00000558080 DNAH10Q8IVF4 4471 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 TRAV9-1A0A075B6T8 112 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 FBLL1A6NHQ2 334 aaKnown RBP5.37□□□□□ -1.55
SPG11-205ENST00000558080 A8MTW9 85 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 ZNF705GA8MUZ8 300 aaPredicted RBP5.37□□□□□ -1.55
SPG11-205ENST00000558080 K7EN84 100 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 PRM2P04554 102 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 MGST1P10620 155 aaKnown RBP5.37□□□□□ -1.55
SPG11-205ENST00000558080 HTN3P15516 51 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 ERVFC1-1P60608 527 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 RAB5BP61020 215 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 FLI1Q01543 452 aaPredicted RBP5.37□□□□□ -1.55
SPG11-205ENST00000558080 HIST1H1AQ02539 215 aaPredicted RBP5.37□□□□□ -1.55
SPG11-205ENST00000558080 PSG3Q16557 428 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 SPINK13Q1W4C9 94 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 RRN3P1Q2M238 152 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 EXOC3-AS1Q8N2X6 119 aa5.37□□□□□ -1.55
SPG11-205ENST00000558080 TMEM75Q8N9X5 138 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms