RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 OR1S2Q8NGQ3 325 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 Q8WTZ3 238 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 SOSTQ9BQB4 213 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 C20orf85Q9H1P6 137 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 ENY2Q9NPA8 101 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 COMMD3Q9UBI1 195 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 LINC00588Q9Y4M8 146 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 F5H768 121 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 F6UB75 175 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 GOSR2O14653 212 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 PHOX2AO14813 284 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 GSTZ1O43708 216 aaPredicted RBP4.07□□□□□ -1.76
VPS33B-207ENST00000557470 ADAP1O75689 374 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 PRM2P04554 102 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 SNRPCP09234 159 aaKnown RBP4.07□□□□□ -1.76
VPS33B-207ENST00000557470 CCL18P55774 89 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 PSG9Q00887 426 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 SRSF9Q13242 221 aaKnown RBP eCLIP4.07□□□□□ -1.76
VPS33B-207ENST00000557470 RRN3P1Q2M238 152 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 COX19Q49B96 90 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 OCIAD2Q56VL3 154 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 UBE2NLQ5JXB2 153 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 TMEM69Q5SWH9 247 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 C1orf194Q5T5A4 169 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 FAM78BQ5VT40 261 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 ALKAL2Q6UX46 152 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 TMEM144Q7Z5S9 345 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 ZNF738Q8NE65 137 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 TP53RKQ96S44 253 aa4.07□□□□□ -1.76
VPS33B-207ENST00000557470 A0A0G2JRQ6 117 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 A0A0J9YX75 114 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 KANTRA0A1W2PQU2 76 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 NAP1L6A6NFF2 107 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 LYRM9A8MSI8 78 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 ZNF705GA8MUZ8 300 aaPredicted RBP4.06□□□□□ -1.76
VPS33B-207ENST00000557470 M0QXV9 152 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 SOCS3O14543 225 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 DEFB130BP0DP73 79 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 DEFB130AP0DP74 79 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 SLC25A4P12235 298 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 PGAM2P15259 253 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 PRSS3P35030 304 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 AMTP48728 403 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 PSMB3P49720 205 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 PAX9P55771 341 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 XGP55808 180 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 RND3P61587 244 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 LAGE3Q14657 143 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 Q5VSD8 79 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 SPATA31B1PQ5VZV4 182 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 EBLN2Q6P2I7 272 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 HIST3H2BBQ8N257 126 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 ZNF664Q8N3J9 261 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 OR51G1Q8NGK1 321 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 PCNPQ8WW12 178 aaKnown RBP4.06□□□□□ -1.76
VPS33B-207ENST00000557470 GPR146Q96CH1 333 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 S100A16Q96FQ6 103 aaKnown RBP4.06□□□□□ -1.76
VPS33B-207ENST00000557470 SLC35E1Q96K37 410 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 C17orf77Q96MU5 243 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 ARL6Q9H0F7 186 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 Q9HAA7 133 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 UQCC1Q9NVA1 299 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 KLK11Q9UBX7 282 aa4.06□□□□□ -1.76
VPS33B-207ENST00000557470 VPS13BQ7Z7G8 4022 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 C3orf85A0A1B0GTC6 90 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 PLAC8L1A1L4L8 177 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 SNRPGP15A8MWD9 76 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 SIX6O95475 246 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 IFNA5P01569 189 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 PSG1P11464 419 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 FUSP35637 526 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS33B-207ENST00000557470 NDUFA6P56556 154 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 PIGPP57054 158 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 OR2F1Q13607 317 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 ZNF345Q14585 488 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 CLINT1Q14677 625 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 SP6Q3SY56 376 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 C2orf83Q53S99 150 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 TTC32Q5I0X7 151 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 AMTNQ6UX39 209 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 LYPD1Q8N2G4 141 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 NEXN-AS1Q8NBZ9 246 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 OR4C16Q8NGL9 310 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 C15orf40Q8WUR7 153 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 BAALCQ8WXS3 180 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 ACY3Q96HD9 319 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 IGF2BP2-AS1Q96M15 143 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 MLST8Q9BVC4 326 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 Q9H3A6 140 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 WFDC1Q9HC57 220 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 C11orf21Q9P2W6 132 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
VPS33B-207ENST00000557470 A8MTW9 85 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 M0R2Z0 102 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 SLC17A3O00476 420 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 ISLRO14498 428 aa4.04□□□□□ -1.76
VPS33B-207ENST00000557470 CRXO43186 299 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms