RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 COX7A2P2O60397 106 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 CIDEAO60543 219 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 ATP5HO75947 161 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 CD3DP04234 171 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 HOXB5P09067 269 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 HIST1H1EP10412 219 aaKnown RBP5.66□□□□□ -1.5
NEDD1-211ENST00000557454 ZNF266Q14584 549 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 ZNF876PQ49A33 203 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 SCGB2B2Q4G0G5 96 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 Q6AWC8 147 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 LYZL2Q7Z4W2 148 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 EXOC3-AS1Q8N2X6 119 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 SAMD12Q8N8I0 201 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 RAB2BQ8WUD1 216 aa5.66□□□□□ -1.5
NEDD1-211ENST00000557454 C14orf166Q9Y224 244 aaKnown RBP5.66□□□□□ -1.5
NEDD1-211ENST00000557454 TRBV19A0A075B6N1 114 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 TMEM262E9PQX1 116 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 AGPAT2O15120 278 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 NDUFS6O75380 124 aaKnown RBP5.65□□□□□ -1.5
NEDD1-211ENST00000557454 NDUFB4O95168 129 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.5
NEDD1-211ENST00000557454 TYMSP04818 313 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 MIAQ16674 131 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 MPV17L2Q567V2 206 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 SPANXN5Q5MJ07 72 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 CLPSL2Q6UWE3 100 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 TERB2Q8NHR7 220 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 SOSTQ9BQB4 213 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 SDF2L1Q9HCN8 221 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 PRELID1Q9Y255 219 aa5.65□□□□□ -1.5
NEDD1-211ENST00000557454 SSPOA2VEC9 5147 aa5.65□□□□□ -1.51
NEDD1-211ENST00000557454 IGLV1-50A0A075B6I6 118 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 A0A0B4J2A0 478 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 K7EPK0 472 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 WRBO00258 174 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 CTDSPLO15194 276 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 TSPAN13O95857 204 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 IFNA7P01567 189 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 RPS19P39019 145 aaKnown RBP5.64□□□□□ -1.51
NEDD1-211ENST00000557454 RPP30P78346 268 aaKnown RBP5.64□□□□□ -1.51
NEDD1-211ENST00000557454 PXDC1Q5TGL8 231 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 OR51S1Q8NGJ8 323 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 SHPKQ9UHJ6 478 aa5.64□□□□□ -1.51
NEDD1-211ENST00000557454 A0A096LNI7 61 aa5.63□□□□□ -1.51
NEDD1-211ENST00000557454 TRBV7-9A0A0J9YWB2 115 aa5.63□□□□□ -1.51
NEDD1-211ENST00000557454 CAV2P51636 162 aa5.63□□□□□ -1.51
NEDD1-211ENST00000557454 PTTG1IPP53801 180 aa5.63□□□□□ -1.51
NEDD1-211ENST00000557454 RRAS2P62070 204 aaPredicted RBP5.63□□□□□ -1.51
NEDD1-211ENST00000557454 C10orf113Q5VZT2 155 aa5.63□□□□□ -1.51
NEDD1-211ENST00000557454 OR2T35Q8NGX2 323 aa5.63□□□□□ -1.51
NEDD1-211ENST00000557454 CIB3Q96Q77 187 aaPredicted RBP5.63□□□□□ -1.51
NEDD1-211ENST00000557454 A0A087WWL8 130 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 B5MCH6 92 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 GOSR2O14653 212 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 FGF8P55075 233 aaPredicted RBP5.62□□□□□ -1.51
NEDD1-211ENST00000557454 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 C14orf178Q8N769 122 aaPredicted RBP5.62□□□□□ -1.51
NEDD1-211ENST00000557454 TRIM63Q969Q1 353 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 ATP5SQ99766 215 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 SLC39A9Q9NUM3 307 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 STRAPQ9Y3F4 350 aaKnown RBP5.62□□□□□ -1.51
NEDD1-211ENST00000557454 TIMM9Q9Y5J7 89 aa5.62□□□□□ -1.51
NEDD1-211ENST00000557454 USH2AO75445 5202 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 IGLV10-54A0A075B6I4 117 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 LOC100506127A0A0U1RQW1 187 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 DIRC3C9JPN6 131 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 SYNGR2O43760 224 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 MED6O75586 246 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 CRYGAP11844 174 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 ZNF506Q5JVG8 444 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 FER1L6-AS1Q8NA97 138 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 AAMDCQ9H7C9 122 aa5.61□□□□□ -1.51
NEDD1-211ENST00000557454 TRAV1-1A0A0B4J248 108 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 FAM24AA6NFZ4 105 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 TBPP20226 339 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 SRPXP78539 464 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 PDE6HQ13956 83 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 FAAP20Q6NZ36 180 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 IZUMO2Q6UXV1 221 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 OR2G3Q8NGZ4 309 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 DIRC1Q969H9 104 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 GFRA4Q9GZZ7 299 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 PARLQ9H300 379 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 PRR34Q9NV39 138 aa5.6□□□□□ -1.51
NEDD1-211ENST00000557454 PGPEP1LA6NFU8 196 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 RAB3DO95716 219 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 MT-ND6P03923 174 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 PYYP10082 97 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 RPS10P46783 165 aaKnown RBP5.59□□□□□ -1.51
NEDD1-211ENST00000557454 UBE2D1P51668 147 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 LINC00269Q8N2A0 174 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 OR10G7Q8NGN6 311 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 NPVFQ9HCQ7 196 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 GPR132Q9UNW8 380 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 KCNIP3Q9Y2W7 256 aa5.59□□□□□ -1.51
NEDD1-211ENST00000557454 H0Y9J4 135 aa5.58□□□□□ -1.52
NEDD1-211ENST00000557454 NHLH2Q02577 135 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms