RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DEFA3P59666 94 aa10.78□□□□□ -0.68
TUBB3-213ENST00000557262 GOLT1AQ6ZVE7 132 aa10.78□□□□□ -0.68
TUBB3-213ENST00000557262 WFDC10BQ8IUB3 73 aa10.78□□□□□ -0.68
TUBB3-213ENST00000557262 TREM1Q9NP99 234 aa10.78□□□□□ -0.68
TUBB3-213ENST00000557262 MSRB1Q9NZV6 116 aa10.78□□□□□ -0.68
TUBB3-213ENST00000557262 A0A087WTM6 91 aa10.77□□□□□ -0.69
TUBB3-213ENST00000557262 DNAH10OSP0CZ25 163 aa10.77□□□□□ -0.69
TUBB3-213ENST00000557262 FUSP35637 526 aaKnown RBP eCLIP10.77□□□□□ -0.69
TUBB3-213ENST00000557262 TVP23CQ96ET8 276 aa10.77□□□□□ -0.69
TUBB3-213ENST00000557262 KCNS1Q96KK3 526 aa10.77□□□□□ -0.69
TUBB3-213ENST00000557262 TYMSP04818 313 aa10.76□□□□□ -0.69
TUBB3-213ENST00000557262 RAB2AP61019 212 aa10.76□□□□□ -0.69
TUBB3-213ENST00000557262 SH2D6Q7Z4S9 175 aa10.76□□□□□ -0.69
TUBB3-213ENST00000557262 OR10G9Q8NGN4 311 aa10.76□□□□□ -0.69
TUBB3-213ENST00000557262 OR10G7Q8NGN6 311 aa10.76□□□□□ -0.69
TUBB3-213ENST00000557262 SDF2L1Q9HCN8 221 aa10.76□□□□□ -0.69
TUBB3-213ENST00000557262 TRAV8-1A0A0A6YYK1 113 aa10.75□□□□□ -0.69
TUBB3-213ENST00000557262 F6UZH7 168 aa10.75□□□□□ -0.69
TUBB3-213ENST00000557262 LOC100131303A0A0U1RQF7 123 aa10.74□□□□□ -0.69
TUBB3-213ENST00000557262 EPM2AB3EWF7 344 aa10.74□□□□□ -0.69
TUBB3-213ENST00000557262 HMGB3O15347 200 aaKnown RBP10.74□□□□□ -0.69
TUBB3-213ENST00000557262 CRYGDP07320 174 aa10.74□□□□□ -0.69
TUBB3-213ENST00000557262 GNG5P63218 68 aa10.74□□□□□ -0.69
TUBB3-213ENST00000557262 C10orf126Q8N4M7 172 aa10.74□□□□□ -0.69
TUBB3-213ENST00000557262 SERTM2A0A1B0GWG4 89 aa10.73□□□□□ -0.69
TUBB3-213ENST00000557262 GATA1P15976 413 aaPredicted RBP10.73□□□□□ -0.69
TUBB3-213ENST00000557262 XGP55808 180 aa10.73□□□□□ -0.69
TUBB3-213ENST00000557262 TIRAPP58753 221 aa10.73□□□□□ -0.69
TUBB3-213ENST00000557262 ASB13Q8WXK3 278 aa10.73□□□□□ -0.69
TUBB3-213ENST00000557262 SGK494Q96LW2 274 aa10.73□□□□□ -0.69
TUBB3-213ENST00000557262 NDFIP1Q9BT67 221 aa10.73□□□□□ -0.69
TUBB3-213ENST00000557262 TAAR5O14804 337 aa10.72□□□□□ -0.69
TUBB3-213ENST00000557262 CIDEAO60543 219 aa10.72□□□□□ -0.69
TUBB3-213ENST00000557262 STAG3L2P0CL84 134 aa10.72□□□□□ -0.69
TUBB3-213ENST00000557262 STAG3L3P0CL85 134 aa10.72□□□□□ -0.69
TUBB3-213ENST00000557262 ARL14EPLP0DKL9 152 aa10.72□□□□□ -0.69
TUBB3-213ENST00000557262 CDC34P49427 236 aaPredicted RBP10.72□□□□□ -0.69
TUBB3-213ENST00000557262 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
TUBB3-213ENST00000557262 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
TUBB3-213ENST00000557262 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.69
TUBB3-213ENST00000557262 K7EQM0 130 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 TCRAP04437 139 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 PFN1P07737 140 aaKnown RBP10.71□□□□□ -0.69
TUBB3-213ENST00000557262 KRTAP10-1P60331 282 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 C5orf17Q8NAS9 161 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 OR2G3Q8NGZ4 309 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 SUN5Q8TC36 379 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 RAB24Q969Q5 203 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
TUBB3-213ENST00000557262 RS1O15537 224 aa10.7□□□□□ -0.7
TUBB3-213ENST00000557262 PPT1P50897 306 aa10.7□□□□□ -0.7
TUBB3-213ENST00000557262 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
TUBB3-213ENST00000557262 SUMO1P63165 101 aaKnown RBP10.7□□□□□ -0.7
TUBB3-213ENST00000557262 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
TUBB3-213ENST00000557262 HSD17B11Q8NBQ5 300 aa10.7□□□□□ -0.7
TUBB3-213ENST00000557262 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
TUBB3-213ENST00000557262 PSMG3Q9BT73 122 aaPredicted RBP10.7□□□□□ -0.7
TUBB3-213ENST00000557262 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
TUBB3-213ENST00000557262 PSG8Q9UQ74 426 aa10.7□□□□□ -0.7
TUBB3-213ENST00000557262 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 TRBV6-4A0A1B0GX49 114 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 MBP02144 154 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 GCSHP23434 173 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 GCHFRP30047 84 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 SERF2P84101 59 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 CFAP126Q5VTH2 177 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 PTH2Q96A98 100 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 EPDR1Q9UM22 224 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 ALG5Q9Y673 324 aa10.69□□□□□ -0.7
TUBB3-213ENST00000557262 IBA57-AS1B1ANH7 110 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 PSCAO43653 123 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 GCGP01275 180 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 ATP6V0CP27449 155 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 FLI1Q01543 452 aaPredicted RBP10.68□□□□□ -0.7
TUBB3-213ENST00000557262 SMUG1Q53HV7 270 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 LINC01556Q5JQF7 62 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 DPPA3Q6W0C5 159 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 C9orf85Q96MD7 179 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 AQP10Q96PS8 301 aa10.68□□□□□ -0.7
TUBB3-213ENST00000557262 PGPEP1LA6NFU8 196 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 CXorf1O96002 111 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 IGLV2-11P01706 119 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 RHOHQ15669 191 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 OR10J3Q5JRS4 329 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 SAPCD1Q5SSQ6 148 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 PRNTQ86SH4 94 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 TMEM167BQ9NRX6 74 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 TNFSF18Q9UNG2 199 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 FAT1Q14517 4588 aa10.67□□□□□ -0.7
TUBB3-213ENST00000557262 HERC1Q15751 4861 aa10.66□□□□□ -0.7
TUBB3-213ENST00000557262 IGHV3-73A0A0B4J1V6 119 aa10.66□□□□□ -0.7
TUBB3-213ENST00000557262 LRCOL1A6NCL2 159 aa10.66□□□□□ -0.7
TUBB3-213ENST00000557262 ZFP69Q49AA0 526 aa10.66□□□□□ -0.7
TUBB3-213ENST00000557262 FRZBQ92765 325 aa10.66□□□□□ -0.7
TUBB3-213ENST00000557262 ACTR3CQ9C0K3 210 aaPredicted RBP10.66□□□□□ -0.7
TUBB3-213ENST00000557262 MGST1P10620 155 aaKnown RBP10.65□□□□□ -0.7
TUBB3-213ENST00000557262 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.7
TUBB3-213ENST00000557262 ZNF506Q5JVG8 444 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms