RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MIR17HGQ75NE6 70 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 LINC00612Q8N6U2 182 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 FAM167A-AS1Q96KT0 104 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 FAM19A4Q96LR4 140 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 SLC25A2Q9BXI2 301 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 PARD6GQ9BYG4 376 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 OR51M1Q9H341 326 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 DNAH17Q9UFH2 4485 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 DNAH2Q9P225 4427 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 TRAV12-3A0A0B4J271 114 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 KLLNB2CW77 178 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 M0R2N4 97 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 DAZ2Q13117 558 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 Q6ZR54 194 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 EXOC3-AS1Q8N2X6 119 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 SCGB1C1Q8TD33 95 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 BLNKQ8WV28 456 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 ATP5SQ99766 215 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 LINC00467Q9BRT7 94 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 AGPAT4-IT1Q9H0P7 198 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 FUT9Q9Y231 359 aa6.86□□□□□ -1.31
HNRNPC-228ENST00000557033 TRBV7-9A0A0J9YWB2 115 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 C7orf71A4D174 169 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 FBLL1A6NHQ2 334 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 ZNF324O75467 553 aaPredicted RBP6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 IFNA5P01569 189 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 CRISP2P16562 243 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 RPL12P30050 165 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 CCL18P55774 89 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 ERCC8Q13216 396 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 SOHLH1Q5JUK2 328 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 TMEM78Q5T7P6 136 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 LYPD1Q8N2G4 141 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 FXYD5Q96DB9 178 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 RPH3ALQ9UNE2 315 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 CHTOPQ9Y3Y2 248 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 HSPB11Q9Y547 144 aa6.85□□□□□ -1.31
HNRNPC-228ENST00000557033 IGLV2-18A0A075B6J9 118 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 H3BNG1 76 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 RTL8CO15255 209 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 GPX1P07203 203 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 CSN1S1P47710 185 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 TAS2R45P59539 299 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 ZNF680Q8NEM1 530 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 C18orf15Q96N68 181 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 ZNF492Q9P255 531 aa6.84□□□□□ -1.31
HNRNPC-228ENST00000557033 HECTD4Q9Y4D8 3996 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 RBAKDNA6NC62 111 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 OR7C2O60412 319 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 OR10J4P0C629 311 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 M6PRP20645 277 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 RNASE4P34096 147 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 ZNF138P52744 262 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 SEC61GP60059 68 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 CD300CQ08708 224 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 OR5I1Q13606 314 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 FFAR4Q5NUL3 377 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 EIF4E3Q8N5X7 224 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 RXFP4Q8TDU9 374 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 VGLL1Q99990 258 aa6.83□□□□□ -1.32
HNRNPC-228ENST00000557033 FAT2Q9NYQ8 4349 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 IGKV2-40A0A087WW87 121 aaPredicted RBP6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 IGKV2D-40P01614 121 aaPredicted RBP6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 XGP55808 180 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 RANP62826 216 aaKnown RBP6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 BTN1A1Q13410 526 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 KHDC3LQ587J8 217 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 IBA57Q5T440 356 aaKnown RBP6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 C1orf134Q5TEV5 83 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 NFE4Q86UQ8 179 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 ZFAND2AQ8N6M9 145 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 C11orf72Q8NBR9 251 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 ZNRF2Q8NHG8 242 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 GNPNAT1Q96EK6 184 aaPredicted RBP6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 SMIM3Q9BZL3 60 aa6.82□□□□□ -1.32
HNRNPC-228ENST00000557033 NACAE9PAV3 2078 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 HERC2O95714 4834 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 A0A1W2PPV4 95 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 SPINK4O60575 86 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 UBE2L3P68036 154 aaKnown RBP6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 ACOT6Q3I5F7 207 aaPredicted RBP6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 FAM74A1Q5RGS3 127 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 Q6ZTI0 123 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 PHYHIPLQ96FC7 376 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 Q9H3A6 140 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 LINC00588Q9Y4M8 146 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 LENEPQ9Y5L5 61 aa6.81□□□□□ -1.32
HNRNPC-228ENST00000557033 TRGV2A0A075B6R0 118 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 IGHV1OR15-1A0A075B7D0 117 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 NBDYA0A0U1RRE5 68 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 PTTG1O95997 202 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 TCL1AP56279 114 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 ZNF266Q14584 549 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 SSX7Q7RTT5 188 aa6.8□□□□□ -1.32
HNRNPC-228ENST00000557033 WFDC1Q9HC57 220 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms